CAZyme3D

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Entry ID

Information for CAZyme ID: QOV24794.1

Basic Information

GenBank IDQOV24794.1
FamilyCBM48, GH13_9
Sequence Length763
UniProt IDA0A7S6U714(100,100)Download
Average pLDDT?95.04
CAZy50 ID24109
CAZy50 RepNo, APR88210.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2779889
KingdomBacteria
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusAnabaenopsis
SpeciesAnabaenopsis elenkinii

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSMTTIIPEQ  VNLIVRNQHH  DPFEILGSHC  IEQNGKKVWA  VRAYLPNATV  ASVILPETRQ60
EYPMKTVHNP  HFFESIIEIA  ELTNYQLRIK  EGEHERVIYD  PYAFRSPKLT  DFDLHLFAEG120
NHHRIYEKMG  AHPTQINGVE  GVYFAVWAPN  ARNVSLLGDF  NLWDGRKHQM  RKGTTGVWEL180
FIPEIGVGEH  YKYEIKNFEG  HIYEKSDPYA  FQQEPRPKTA  SMVTNLNIYT  WGDQNWMEKR240
RHTDPLTQPI  SVYEVHLGSW  LHGSSSEPAK  LPNGETEPVV  VVSELKPGAR  FLTYRELADR300
LIPYVKELGY  THLELLPIAE  HPFDGSWGYQ  VTGYYAPTSR  FGSPEDFMYF  VDQCHQNDIG360
VIIDWVPGHF  PKDGHGLAFF  DGTHLYEHSD  PRKGEHKEWG  TLVFNYNRHE  VRNFLVANAL420
FWFDKYHIDG  IRVDAVASML  YLDYCRKAGE  WLPNQYGGRE  NLEAADFLRQ  VNHIIFSYFP480
GILSIAEEST  SWPMVSWPTY  TGGLGFNLKW  NMGWMHDMLD  YFSMDPWFRQ  FHQNNITFSM540
WYNHSENFML  ALSHDEVVHG  KSNIIGKMPG  DTWQKLANVR  CLFSYMFAHP  GKKTMFMSME600
FGQWSEWNVW  ADLEWQLLQY  EDHQQLKKFF  QDINCLYRSE  PALYTQDFAQ  DGFEWIDCSD660
NRHSVVSFIR  RDKDSDDFIV  VICNFTPQPH  SHYRIGVPEA  GFYTELFNSD  ARPYGGSNMG720
NLGGKWTDNW  YLHSCPYSLD  LCLPPLGVLM  LKLDRHKTSE  RMA763

Predicted 3D structure by AlphaFold2 with pLDDT = 95.04 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(26-106)+CBM48(128-213)+GH13_9(303-603)

MSMTTIIPEQ  VNLIVRNQHH  DPFEILGSHC  IEQNGKKVWA  VRAYLPNATV  ASVILPETRQ60
EYPMKTVHNP  HFFESIIEIA  ELTNYQLRIK  EGEHERVIYD  PYAFRSPKLT  DFDLHLFAEG120
NHHRIYEKMG  AHPTQINGVE  GVYFAVWAPN  ARNVSLLGDF  NLWDGRKHQM  RKGTTGVWEL180
FIPEIGVGEH  YKYEIKNFEG  HIYEKSDPYA  FQQEPRPKTA  SMVTNLNIYT  WGDQNWMEKR240
RHTDPLTQPI  SVYEVHLGSW  LHGSSSEPAK  LPNGETEPVV  VVSELKPGAR  FLTYRELADR300
LIPYVKELGY  THLELLPIAE  HPFDGSWGYQ  VTGYYAPTSR  FGSPEDFMYF  VDQCHQNDIG360
VIIDWVPGHF  PKDGHGLAFF  DGTHLYEHSD  PRKGEHKEWG  TLVFNYNRHE  VRNFLVANAL420
FWFDKYHIDG  IRVDAVASML  YLDYCRKAGE  WLPNQYGGRE  NLEAADFLRQ  VNHIIFSYFP480
GILSIAEEST  SWPMVSWPTY  TGGLGFNLKW  NMGWMHDMLD  YFSMDPWFRQ  FHQNNITFSM540
WYNHSENFML  ALSHDEVVHG  KSNIIGKMPG  DTWQKLANVR  CLFSYMFAHP  GKKTMFMSME600
FGQWSEWNVW  ADLEWQLLQY  EDHQQLKKFF  QDINCLYRSE  PALYTQDFAQ  DGFEWIDCSD660
NRHSVVSFIR  RDKDSDDFIV  VICNFTPQPH  SHYRIGVPEA  GFYTELFNSD  ARPYGGSNMG720
NLGGKWTDNW  YLHSCPYSLD  LCLPPLGVLM  LKLDRHKTSE  RMA763

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help