CAZyme3D

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Entry ID

Information for CAZyme ID: QOS78175.1

Basic Information

GenBank IDQOS78175.1
FamilyGH36
Sequence Length685
UniProt IDA0A7M2A6K9(100,100)Download
Average pLDDT?95.14
CAZy50 ID39198
CAZy50 RepNo, ANS74345.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2777983
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. JNUCC-31

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMLTSDTAVQ  VQQQNGNLVS  VTNGRVNLEI  NLENGEVSCI  GNHSSYVKGI  RSAFRWQGRE60
YGTDHYQVHE  LTAQEDIVRE  GFGKGIRLVI  LHKNPLLPQL  EQHFYMYESS  PFVLVQTAIV120
GDEELKANRM  AVIQSKTISL  GGESGQDEPS  ILRVPFDNDK  WVRYTVVKPP  LDEESYEATA180
LFAPHSRRGI  VMGSLTHKVW  KTGIRMQSEK  SGHIEGLDLY  GGAVSELTRD  SQPHGYVKGK240
RVESPLVFIG  FYEDYREGLE  AYGQANIWIE  PQLPWEGGVP  IGWNSWSAAM  SDLDYDLYTA300
TSDFLKNEVQ  PLGFQNEDTL  YINFDAFWDN  FTPEEMKRAL  DRVRQNGHRA  GTYWTPFAFW360
GGPDQFGQAV  EGTNGKYTYA  DILLRDSEGE  ILPDVDGGLA  IDPTHPGNLQ  RIDWFTDKFI420
SEGFEYIKLD  FLAHGALEGQ  HHNSDITTGI  AAYHYGMSYL  QHKLSPEVIG  RPFFINLSIA480
PLFPYAFAHS  RRISCDVFGT  LADTEYLLNS  LTHGWWMSNT  LYRYNDPDHS  VLYKSFNQEA540
TGWHEGRSRL  TASVIAGTVL  LLGDDFRKEE  AAERAREWLG  NKDILNVARM  GRTFRPVEGD600
LGKLSSDVFV  LESPEEKSFY  LAVFNFDAAQ  AAVKSISLER  AGLNAKTVYG  LQDLWKRSYG660
ETSGELTVSL  EPAESKIFRL  TVKEN685

Predicted 3D structure by AlphaFold2 with pLDDT = 95.14 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH27(417-658)

MMLTSDTAVQ  VQQQNGNLVS  VTNGRVNLEI  NLENGEVSCI  GNHSSYVKGI  RSAFRWQGRE60
YGTDHYQVHE  LTAQEDIVRE  GFGKGIRLVI  LHKNPLLPQL  EQHFYMYESS  PFVLVQTAIV120
GDEELKANRM  AVIQSKTISL  GGESGQDEPS  ILRVPFDNDK  WVRYTVVKPP  LDEESYEATA180
LFAPHSRRGI  VMGSLTHKVW  KTGIRMQSEK  SGHIEGLDLY  GGAVSELTRD  SQPHGYVKGK240
RVESPLVFIG  FYEDYREGLE  AYGQANIWIE  PQLPWEGGVP  IGWNSWSAAM  SDLDYDLYTA300
TSDFLKNEVQ  PLGFQNEDTL  YINFDAFWDN  FTPEEMKRAL  DRVRQNGHRA  GTYWTPFAFW360
GGPDQFGQAV  EGTNGKYTYA  DILLRDSEGE  ILPDVDGGLA  IDPTHPGNLQ  RIDWFTDKFI420
SEGFEYIKLD  FLAHGALEGQ  HHNSDITTGI  AAYHYGMSYL  QHKLSPEVIG  RPFFINLSIA480
PLFPYAFAHS  RRISCDVFGT  LADTEYLLNS  LTHGWWMSNT  LYRYNDPDHS  VLYKSFNQEA540
TGWHEGRSRL  TASVIAGTVL  LLGDDFRKEE  AAERAREWLG  NKDILNVARM  GRTFRPVEGD600
LGKLSSDVFV  LESPEEKSFY  LAVFNFDAAQ  AAVKSISLER  AGLNAKTVYG  LQDLWKRSYG660
ETSGELTVSL  EPAESKIFRL  TVKEN685

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help