Information for CAZyme ID: QOS16774.1
Basic Information
| GenBank ID | QOS16774.1 |
| Family | GT2 |
| Sequence Length | 752 |
| UniProt ID | A0A7M1WAB8(100,100) |
| Average pLDDT? | 86.89 |
| CAZy50 ID | 32465 |
| CAZy50 Rep | No, QOS22567.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 670 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNQINNSIIL LAEQAAECNQ IQHGSTQEFR SEGQDPHWIW EELDLTEGWY KATAQIQITA | 60 |
| DYVTPHKFYH GVAHVFSEQQ SCSFEQIDES IYVTYFYVES KCTDIRYDPM ETIGHVTFEG | 120 |
| LSIEACETDK VPEKYLINKQ TEHATSTVER IKRMKAFPYL NKALHKMPRL RAFVVKCFSA | 180 |
| SNASAQVEHY NEWLKINEQI PNKEFQQKQA SKLASKPLIS VVMPTYNTDP KLLQECIDSV | 240 |
| LEQGYQHWEL CIADDASTNT ATKELLESYV QRDNRIKVTY RETNGHICRA TNDALELTSG | 300 |
| EWIALLDHDD LLAPHALLTI AKAINANPSA DIFYSDEDKI TLDGTRTDPH LKPQWSRDLL | 360 |
| YSHNYISHLG VYRKEIIYSV GGFRIGFEGS QDYDLLLRCI NHIESNVCGR DLTNKIIHVP | 420 |
| HILYHWRVLE GSTALSEGQK SYSQDSGVKA LQSALPNTIV EPGPLANTYK VNWPIASEEP | 480 |
| LVSLVIPTKN GMELVKQCIE SIEKLTSYKN WEILLVDNQS DKAEDIAYFK QLSRDKRILL | 540 |
| LSYDKPFNYS AINNYAIEYA QGSIVVLLNN DVEVISPDWL SEMVSLCSRD EIGCVGAKLY | 600 |
| YPNDTLQHAG VILGLGGVAG HSHKYFDKDQ DGYFKRLKIR QNLSAVTAAC LAVRKDVYNQ | 660 |
| VNGLNEEDLT VAFNDVDFCL KVQAAGYKNV WTPYAELYHH ESISRGTEDT PEKRARFASE | 720 |
| VDYMKRTWNS ELRNDPYYHP LLTRDREDFS KR | 752 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.89 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT2(220-377)+GT2(483-659)
| MNQINNSIIL LAEQAAECNQ IQHGSTQEFR SEGQDPHWIW EELDLTEGWY KATAQIQITA | 60 |
| DYVTPHKFYH GVAHVFSEQQ SCSFEQIDES IYVTYFYVES KCTDIRYDPM ETIGHVTFEG | 120 |
| LSIEACETDK VPEKYLINKQ TEHATSTVER IKRMKAFPYL NKALHKMPRL RAFVVKCFSA | 180 |
| SNASAQVEHY NEWLKINEQI PNKEFQQKQA SKLASKPLIS VVMPTYNTDP KLLQECIDSV | 240 |
| LEQGYQHWEL CIADDASTNT ATKELLESYV QRDNRIKVTY RETNGHICRA TNDALELTSG | 300 |
| EWIALLDHDD LLAPHALLTI AKAINANPSA DIFYSDEDKI TLDGTRTDPH LKPQWSRDLL | 360 |
| YSHNYISHLG VYRKEIIYSV GGFRIGFEGS QDYDLLLRCI NHIESNVCGR DLTNKIIHVP | 420 |
| HILYHWRVLE GSTALSEGQK SYSQDSGVKA LQSALPNTIV EPGPLANTYK VNWPIASEEP | 480 |
| LVSLVIPTKN GMELVKQCIE SIEKLTSYKN WEILLVDNQS DKAEDIAYFK QLSRDKRILL | 540 |
| LSYDKPFNYS AINNYAIEYA QGSIVVLLNN DVEVISPDWL SEMVSLCSRD EIGCVGAKLY | 600 |
| YPNDTLQHAG VILGLGGVAG HSHKYFDKDQ DGYFKRLKIR QNLSAVTAAC LAVRKDVYNQ | 660 |
| VNGLNEEDLT VAFNDVDFCL KVQAAGYKNV WTPYAELYHH ESISRGTEDT PEKRARFASE | 720 |
| VDYMKRTWNS ELRNDPYYHP LLTRDREDFS KR | 752 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.