Information for CAZyme ID: QOL45408.1
Basic Information
| GenBank ID | QOL45408.1 |
| Family | CBM50, GH25 |
| Sequence Length | 411 |
| UniProt ID | A0A7L9TRY0(100,100) |
| Average pLDDT? | 71.58 |
| CAZy50 ID | 87002 |
| CAZy50 Rep | No, QTL74948.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1682 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium longum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MGRFKNRSKP LQALIAALFA VLLACTPAIA MADMVGIDVS GWQGSNVTCT ASYDFAVVKV | 60 |
| SQGVGFENSS WRTQAKCVTD RGKSLGLYHY AGGNNAEAEA DYFVGRARDY IGRAVLVLDW | 120 |
| ESYQNAQWGN SDWVRRFVQR VHTLTGVWPM VYVQASALGQ IPGDVRANCG LWVAQYASNA | 180 |
| PTGYQSRPWN YAIYGEAMRQ YTSNGWISGY NGPLDLNYFR GDASQWQAYA NPAGAAKPAT | 240 |
| PPQTEKPPTQ TIDLQALATA TIRGDYGNGQ QRRDALGANY DKVMAIVNQR LAGTATVAPQ | 300 |
| QAAQANTTRV AVRSGDTMSG IASRTGLWPL SKWSVPSGNL NLIYPGQVVT YNGGGSVATG | 360 |
| SNAPPATRTV TVRSGDTLSG IAARLGIGYT QLTGYRSGNP NVIYPGEVLH Y | 411 |
Predicted 3D structure by AlphaFold2 with pLDDT = 71.58 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH25(37-209)+CBM50(312-349)+CBM50(371-409)
| MGRFKNRSKP LQALIAALFA VLLACTPAIA MADMVGIDVS GWQGSNVTCT ASYDFAVVKV | 60 |
| SQGVGFENSS WRTQAKCVTD RGKSLGLYHY AGGNNAEAEA DYFVGRARDY IGRAVLVLDW | 120 |
| ESYQNAQWGN SDWVRRFVQR VHTLTGVWPM VYVQASALGQ IPGDVRANCG LWVAQYASNA | 180 |
| PTGYQSRPWN YAIYGEAMRQ YTSNGWISGY NGPLDLNYFR GDASQWQAYA NPAGAAKPAT | 240 |
| PPQTEKPPTQ TIDLQALATA TIRGDYGNGQ QRRDALGANY DKVMAIVNQR LAGTATVAPQ | 300 |
| QAAQANTTRV AVRSGDTMSG IASRTGLWPL SKWSVPSGNL NLIYPGQVVT YNGGGSVATG | 360 |
| SNAPPATRTV TVRSGDTLSG IAARLGIGYT QLTGYRSGNP NVIYPGEVLH Y | 411 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.