Information for CAZyme ID: QOJ91437.1
Basic Information
GenBank ID | QOJ91437.1 |
Family | GH50 |
Sequence Length | 744 |
UniProt ID | A0A7L9GGL9(100,100)![]() |
Average pLDDT? | 92.81 |
CAZy50 ID | 25089 |
CAZy50 Rep | No, BBP81741.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 470150 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Pseudomonadales |
Family | Pseudomonadaceae |
Genus | Pseudomonas |
Species | Pseudomonas taiwanensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MIRRTLPAVF ALLCSSPLLA GQQTLFSFVR PASVVNVATV DAGMPQYNAE QTAEGEVLRR | 60 |
VVFNPAQQPT LRLSPQSGVW DWSAGQFLTL RLQSAMDWAL TVDVTVQGSD GRTLTSRIDL | 120 |
PAGPAQTVLV PLTASSPLDQ GMRAGPPMPW NHGGQRLLLT SSAGAIDLKQ VTSVSLSIPS | 180 |
PKVAQSLLIE RVGIQDDNQA YRAAYHELID AYGQSTRGNW PEKVSSDEQL KAADTREQQQ | 240 |
LKGWLAERGK QRLDAYGGLV GGPAFAAKGF FRTEKRDGRW YLVTPDGHPF YSLGVNAVAA | 300 |
DGGRTYVAGR EGMFKALPAE GDALAAFYGE SNNDDGNASS QGRNFKQGRW FDFYAANLQR | 360 |
TYGKPCPPAV EGQPADCAPP LLDADRWQAH ALDRLQAWGF NTVGNWSEPA LGQARRMPYT | 420 |
LPLSIVGDYA SISTGMDWWG RMPDPFDPRF AMATERAVAI AARDHRDDPW LIGYFADNEL | 480 |
AWAAPGSDPK SRYGLAYGTL RLTTDVPAKR AFLKQLRDKY RNQEGLSKAW GIELTAWELM | 540 |
EDPGFEAPLP DPEHPEIERD YQHFQRVFAE TYFKTISDSL KWHAPNHMLL GGRYAVSTPE | 600 |
AVKACAEFCD VLSFNFYTLK PQDGYDFVRL AELDKPVLVS EFQFGSRDRG PFWPGPLELA | 660 |
REEDRGPAYA NFLKAAMAQP MIVGAHWFQY LDQPASGRLL DGENGHLGLV AITDRPYPGF | 720 |
VDAVRKSNLQ TMNQLRAELE KPAP | 744 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.81 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH50(75-731)
MIRRTLPAVF ALLCSSPLLA GQQTLFSFVR PASVVNVATV DAGMPQYNAE QTAEGEVLRR | 60 |
VVFNPAQQPT LRLSPQSGVW DWSAGQFLTL RLQSAMDWAL TVDVTVQGSD GRTLTSRIDL | 120 |
PAGPAQTVLV PLTASSPLDQ GMRAGPPMPW NHGGQRLLLT SSAGAIDLKQ VTSVSLSIPS | 180 |
PKVAQSLLIE RVGIQDDNQA YRAAYHELID AYGQSTRGNW PEKVSSDEQL KAADTREQQQ | 240 |
LKGWLAERGK QRLDAYGGLV GGPAFAAKGF FRTEKRDGRW YLVTPDGHPF YSLGVNAVAA | 300 |
DGGRTYVAGR EGMFKALPAE GDALAAFYGE SNNDDGNASS QGRNFKQGRW FDFYAANLQR | 360 |
TYGKPCPPAV EGQPADCAPP LLDADRWQAH ALDRLQAWGF NTVGNWSEPA LGQARRMPYT | 420 |
LPLSIVGDYA SISTGMDWWG RMPDPFDPRF AMATERAVAI AARDHRDDPW LIGYFADNEL | 480 |
AWAAPGSDPK SRYGLAYGTL RLTTDVPAKR AFLKQLRDKY RNQEGLSKAW GIELTAWELM | 540 |
EDPGFEAPLP DPEHPEIERD YQHFQRVFAE TYFKTISDSL KWHAPNHMLL GGRYAVSTPE | 600 |
AVKACAEFCD VLSFNFYTLK PQDGYDFVRL AELDKPVLVS EFQFGSRDRG PFWPGPLELA | 660 |
REEDRGPAYA NFLKAAMAQP MIVGAHWFQY LDQPASGRLL DGENGHLGLV AITDRPYPGF | 720 |
VDAVRKSNLQ TMNQLRAELE KPAP | 744 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.