CAZyme3D

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Entry ID

Information for CAZyme ID: QNT66876.1

Basic Information

GenBank IDQNT66876.1
FamilyCE2
Sequence Length371
UniProt IDA0A7H1MTU0(100,100)Download
Average pLDDT?93.63
CAZy50 ID115037
CAZy50 RepNo, ADE83543.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID165179
KingdomBacteria
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKKVWVMMLA  TLMVSSTMMA  GNVKKSTTLP  IEGEIVKASH  PMIQYVGRVS  FAKNPDVASF60
NYPGTTIEAS  FQGSSLKMLC  RPKTGYFMAQ  IDGCEPFKVG  FNAERDSVVT  LAAALPKGVH120
HAKVMYVIEG  LFRKPEFRGF  VLDKGCHLVE  APALPERKIE  FIGNSITCGY  GVESINRSDP180
FEDETENHWL  TYANIVSDSL  KAQHTSISRS  GIGVYRNYNG  PKTGDADNMS  WQYEYTLFDQ240
HDEKWDFAKY  QPQLVCINLG  TNDLSTKNYD  IQLYEKNYRM  FLKTVRSKYP  HAKIVMLTGP300
MLGEKESSKQ  RTVLDRICAD  ANKTDKNIYR  FDFSFQKGDL  GYGASWHPSM  LQHRKMAAEL360
LPFLRKLMNW  N371

Predicted 3D structure by AlphaFold2 with pLDDT = 93.63 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(158-363)

MKKVWVMMLA  TLMVSSTMMA  GNVKKSTTLP  IEGEIVKASH  PMIQYVGRVS  FAKNPDVASF60
NYPGTTIEAS  FQGSSLKMLC  RPKTGYFMAQ  IDGCEPFKVG  FNAERDSVVT  LAAALPKGVH120
HAKVMYVIEG  LFRKPEFRGF  VLDKGCHLVE  APALPERKIE  FIGNSITCGY  GVESINRSDP180
FEDETENHWL  TYANIVSDSL  KAQHTSISRS  GIGVYRNYNG  PKTGDADNMS  WQYEYTLFDQ240
HDEKWDFAKY  QPQLVCINLG  TNDLSTKNYD  IQLYEKNYRM  FLKTVRSKYP  HAKIVMLTGP300
MLGEKESSKQ  RTVLDRICAD  ANKTDKNIYR  FDFSFQKGDL  GYGASWHPSM  LQHRKMAAEL360
LPFLRKLMNW  N371

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help