Information for CAZyme ID: QNQ10476.1
Basic Information
| GenBank ID | QNQ10476.1 |
| Family | CE4, GH18, GT2 |
| Sequence Length | 1120 |
| UniProt ID | A0A7H0LLC3(100,100) |
| Average pLDDT? | 87.16 |
| CAZy50 ID | 9646 |
| CAZy50 Rep | No, AVZ25605.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 653931 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTQQSIFYDS SGRRRRRFGV AVVAFVLLVV VAVAALAISI GAVPRAPLLP VVAEHPALTK | 60 |
| LPPPHEPLLK RTKHRLFDYA RLLTGRKRGV AEDVPLAIGF HVPWDESSAA SLREHIGELD | 120 |
| WLIPGWVSVT GADHKISVFR DDAGRNVINH SPHRPLLLPM IQNAIQGDWD SAGMAALLRA | 180 |
| PAQRKALLDR LEPWLAANQA GGAFFDFEEL PAASQKDYQA FLREAKARFA KRNWVVAIAV | 240 |
| PVGDESWNIK AYAAIVDRVF LMAYDEHELS GEPGPIASQN WFEQAVARAA NGVPKAKLVV | 300 |
| AIGNYGYDWH DKGGEPLAVD EAWEAAQESS AMPVFDKNSG NSGFAYEEGK SRHVVWLLDA | 360 |
| ASAYNQLRFL KRAGLSGVAL WRLGSEDPGL WSIFGRSHRV LPAPSAINAI PAGTDVDIEG | 420 |
| NGEILKIAAV PVAGTRQTIA ARDGSIAGVE FTRLPSPYIV ARTGYKPGEI ALTFDDGPDP | 480 |
| TWTPRILDVL KAKNVHATFF IVGENALTQR SLLNRMVAEG HEIGSHTYTH PNLAGASPAE | 540 |
| TAFQLNTTQR LFQAFTGRSL RLFRAPYFGD AEPTTADEIE PALQAQDRGY ISVGLHVDPD | 600 |
| DWKRPGVQAI IDKTLSMVDA GKAPCGSNSP ANCSRNVVLL HDAGGNRAQT LAALPVIIDQ | 660 |
| LRARGYTLVP VSTLAGIPRD VAMPPISASD RLAAQVDLFI FGTLGTIVTA LGWIFLFAIT | 720 |
| IGILRALTLS ALALIQARRE ARMVFPAIDP ARFVTVMIPA FNEETVIVRA VQGVLASTDV | 780 |
| RIEVIVIDDG SSDRTSQMVQ EAFADEPRVR LLTLENGGKA RALNRGLELA TGEIIIALDA | 840 |
| DTQFEATTIA RLARWFADPA LGAVAGNAKV GNRVNLVTKW QALEYITAQN LERRALARLD | 900 |
| AITVVPGAVG AWRLAAIRQV GGYPDDTLAE DQDLTIAIQR AGWRVTYDQY AVAWTEAPES | 960 |
| FAGLAKQRFR WAFGTLQCLW KHRRVMASGK PRGLARVGLP QAIVFQIILA SISPIIDLAL | 1020 |
| IVSFITTWVA VQAHGWAQTQ HDVEKMLIYW LVFTAIDLLA ATIAFALERR ENWRLLWLLI | 1080 |
| PQRIGYRQVM YYVVLKAITQ ALRGPRVGWG KLARTGRVSV | 1120 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.16 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH18(167-385)+CE4(466-573)+GT2(754-974)
| MTQQSIFYDS SGRRRRRFGV AVVAFVLLVV VAVAALAISI GAVPRAPLLP VVAEHPALTK | 60 |
| LPPPHEPLLK RTKHRLFDYA RLLTGRKRGV AEDVPLAIGF HVPWDESSAA SLREHIGELD | 120 |
| WLIPGWVSVT GADHKISVFR DDAGRNVINH SPHRPLLLPM IQNAIQGDWD SAGMAALLRA | 180 |
| PAQRKALLDR LEPWLAANQA GGAFFDFEEL PAASQKDYQA FLREAKARFA KRNWVVAIAV | 240 |
| PVGDESWNIK AYAAIVDRVF LMAYDEHELS GEPGPIASQN WFEQAVARAA NGVPKAKLVV | 300 |
| AIGNYGYDWH DKGGEPLAVD EAWEAAQESS AMPVFDKNSG NSGFAYEEGK SRHVVWLLDA | 360 |
| ASAYNQLRFL KRAGLSGVAL WRLGSEDPGL WSIFGRSHRV LPAPSAINAI PAGTDVDIEG | 420 |
| NGEILKIAAV PVAGTRQTIA ARDGSIAGVE FTRLPSPYIV ARTGYKPGEI ALTFDDGPDP | 480 |
| TWTPRILDVL KAKNVHATFF IVGENALTQR SLLNRMVAEG HEIGSHTYTH PNLAGASPAE | 540 |
| TAFQLNTTQR LFQAFTGRSL RLFRAPYFGD AEPTTADEIE PALQAQDRGY ISVGLHVDPD | 600 |
| DWKRPGVQAI IDKTLSMVDA GKAPCGSNSP ANCSRNVVLL HDAGGNRAQT LAALPVIIDQ | 660 |
| LRARGYTLVP VSTLAGIPRD VAMPPISASD RLAAQVDLFI FGTLGTIVTA LGWIFLFAIT | 720 |
| IGILRALTLS ALALIQARRE ARMVFPAIDP ARFVTVMIPA FNEETVIVRA VQGVLASTDV | 780 |
| RIEVIVIDDG SSDRTSQMVQ EAFADEPRVR LLTLENGGKA RALNRGLELA TGEIIIALDA | 840 |
| DTQFEATTIA RLARWFADPA LGAVAGNAKV GNRVNLVTKW QALEYITAQN LERRALARLD | 900 |
| AITVVPGAVG AWRLAAIRQV GGYPDDTLAE DQDLTIAIQR AGWRVTYDQY AVAWTEAPES | 960 |
| FAGLAKQRFR WAFGTLQCLW KHRRVMASGK PRGLARVGLP QAIVFQIILA SISPIIDLAL | 1020 |
| IVSFITTWVA VQAHGWAQTQ HDVEKMLIYW LVFTAIDLLA ATIAFALERR ENWRLLWLLI | 1080 |
| PQRIGYRQVM YYVVLKAITQ ALRGPRVGWG KLARTGRVSV | 1120 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.