CAZyme3D

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Entry ID

Information for CAZyme ID: QNP75493.1

Basic Information

GenBank IDQNP75493.1
FamilyCE2
Sequence Length347
UniProt IDA0A7H0IRS7(100,100)Download
Average pLDDT?94.87
CAZy50 ID50341
CAZy50 RepNo, UJP40830.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2768066
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces roseirectus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLAAPVTGTA  DAAPTAVTTQ  AHTPGRVKDD  GDTVRHSWPG  VYFEATVRGT  GVGIVLKDSA60
ADYDVQIDGA  TVATLVTPGD  RTHWISGLQD  RTHSVRLVKR  NDTPWSTSTF  GGFLAAPGGA120
VLARPAARAR  QIEFIGDSLT  VGYGNLSTSR  TCTGDQLRRT  TNTDVSYGAL  TARRLNADYQ180
VNAYSGLGMV  RNYGGGSPDV  AYRTYYDRAL  LNQPGDVWQN  PGTWRPQVVV  VHLGTNDFST240
PVQAGEPWTP  ESLAAGYRAA  YGDFLRKLRT  RYGSNTVLVA  VGAGQFAGHV  EQVVKARNDA300
GDSRVRSWFL  DSAGLDFLGC  DWHYSAHDDR  VIADRLTPYL  ASLPTGW347

Predicted 3D structure by AlphaFold2 with pLDDT = 94.87 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(131-340)

MLAAPVTGTA  DAAPTAVTTQ  AHTPGRVKDD  GDTVRHSWPG  VYFEATVRGT  GVGIVLKDSA60
ADYDVQIDGA  TVATLVTPGD  RTHWISGLQD  RTHSVRLVKR  NDTPWSTSTF  GGFLAAPGGA120
VLARPAARAR  QIEFIGDSLT  VGYGNLSTSR  TCTGDQLRRT  TNTDVSYGAL  TARRLNADYQ180
VNAYSGLGMV  RNYGGGSPDV  AYRTYYDRAL  LNQPGDVWQN  PGTWRPQVVV  VHLGTNDFST240
PVQAGEPWTP  ESLAAGYRAA  YGDFLRKLRT  RYGSNTVLVA  VGAGQFAGHV  EQVVKARNDA300
GDSRVRSWFL  DSAGLDFLGC  DWHYSAHDDR  VIADRLTPYL  ASLPTGW347

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help