CAZyme3D

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Entry ID

Information for CAZyme ID: QNO37905.1

Basic Information

GenBank IDQNO37905.1
FamilyGH3
Sequence Length471
UniProt IDA0A7G9XR97(100,100)Download
Average pLDDT?92.85
CAZy50 ID58674
CAZy50 RepNo, UFS58989.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2759943
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusProtaetiibacter
SpeciesProtaetiibacter sp. SSC-01

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTTSTRGAAL  PTLLPGFVGT  ELPEWLAARL  RDGLGGVCLF  AENIVSVEQL  RALTTAIREA60
NPRALIAIDE  EGGDVSRLHA  ATGSPFPGNA  VLGRVDDTAL  TASVGAAVAA  ELRAAGVNLN120
FAPDVDINSN  PDNPVIGVRS  FGTDPDLVAR  HAAAWVEAHE  AAGVAVSAKH  FPGHGDTNAD180
SHLALPVVDL  PLEVLREREL  VPFVAAIAAG  ARTIMSSHIL  LPQLDAAQPA  TFSPRILQQL240
LRDELGFDGV  VVSDALDMVG  ASGEIGIPAA  AVRALAGGCD  LLCIGTRNTD  AQLTEIETAI300
EAALASGELD  EARLQDAVAR  VTTLAESLPA  ELEEQPEPYA  PDPARIASAF  DVADGVALPA360
EARIVSLETT  ANVAVGTVPW  GLASVGLAPE  PLREGEPLPA  SEVPYLVVGK  DNHRRAWTRD420
IIDAARAAQP  GTVVIDMGWP  APDRAYADIA  TFGASRSVSA  ALREVLDGRE  L471

Predicted 3D structure by AlphaFold2 with pLDDT = 92.85 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH3(60-283)

MTTSTRGAAL  PTLLPGFVGT  ELPEWLAARL  RDGLGGVCLF  AENIVSVEQL  RALTTAIREA60
NPRALIAIDE  EGGDVSRLHA  ATGSPFPGNA  VLGRVDDTAL  TASVGAAVAA  ELRAAGVNLN120
FAPDVDINSN  PDNPVIGVRS  FGTDPDLVAR  HAAAWVEAHE  AAGVAVSAKH  FPGHGDTNAD180
SHLALPVVDL  PLEVLREREL  VPFVAAIAAG  ARTIMSSHIL  LPQLDAAQPA  TFSPRILQQL240
LRDELGFDGV  VVSDALDMVG  ASGEIGIPAA  AVRALAGGCD  LLCIGTRNTD  AQLTEIETAI300
EAALASGELD  EARLQDAVAR  VTTLAESLPA  ELEEQPEPYA  PDPARIASAF  DVADGVALPA360
EARIVSLETT  ANVAVGTVPW  GLASVGLAPE  PLREGEPLPA  SEVPYLVVGK  DNHRRAWTRD420
IIDAARAAQP  GTVVIDMGWP  APDRAYADIA  TFGASRSVSA  ALREVLDGRE  L471

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help