CAZyme3D

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Entry ID

Information for CAZyme ID: QNO15470.1

Basic Information

GenBank IDQNO15470.1
FamilyGT35
Sequence Length788
UniProt IDA0A7G9W9V8(100,100)Download
Average pLDDT?96.19
CAZy50 ID6262
CAZy50 RepNo, CDZ24764.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2731377
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyProteinivoraceae
GenusAlkalicella
SpeciesAlkalicella caledoniensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNKENILKKM  ESYSLTSFGK  TLAKCSYKEK  YIALAKALME  EIVPTWIQSE  EKFEGKKQAY60
YLSAEFLMGR  ALTNNLLNMK  SKAIVEELFE  DMGIDFNTIE  EAEEDAGLGN  GGLGRLAACF120
LDSGATLNYP  LTGYGIRYQF  GIFKQLFIDG  FQVEIGDNWL  EHGDPWSIRK  ASEAITVSFA180
DGDVLAVPYD  TPIIGFGQKT  INTLRLWQAE  ALNKFDFEEF  NHQNYDLSVK  DKNDAENISK240
VLYPNDSNDE  GKLLRLKQQY  FFVSASLQDL  VRKYKEKYQD  HNFDNFAKLH  AVQLNDTHPG300
VAIPEMMRLL  TQQENLSWEK  AWKIVVDTFA  YTNHTLLAEA  LEQWSVKLYQ  ELLPEVYEII360
VKIDQQLREE  LEAKGITKKE  LPQFEIISNG  MIKMAWLSIY  GTKSTNGVAQ  LHTDLLTEVE420
LNHWYKLYPE  RFNNKTNGIT  QRRWLLQSNP  ELSNYITELL  GSDNWITNLE  ELKKLNQVSD480
DKEVLKEFIN  IKQTKKNQLA  DYIKENEGIE  VDPKSIFDIQ  IKRLHEYKRQ  LLKAFYILDL540
YYRLKEDPSL  DIVPRTFIFG  AKAAPGYFRA  KGIIKFINEI  KKLVNNDSEI  NGKIKVVFVE600
NYRVSYAERL  FPAADISEQI  STAGKEASGT  GNMKFMLNGA  PTIGTYDGAN  VEIVEEAGEE660
NNFIFGLRVE  DIAKIENYDP  KAEYVNVKGL  QRVIDSLIDG  TFDDGGTGMF  KELHDSILKG720
ASWHKPDNYY  IVRDFDDYRK  AQLEVDQAFR  EKMTWAKKCW  LNIANAGKFS  SDRTIDQYAK780
EIWGIEKA788

Predicted 3D structure by AlphaFold2 with pLDDT = 96.19 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(90-786)

MNKENILKKM  ESYSLTSFGK  TLAKCSYKEK  YIALAKALME  EIVPTWIQSE  EKFEGKKQAY60
YLSAEFLMGR  ALTNNLLNMK  SKAIVEELFE  DMGIDFNTIE  EAEEDAGLGN  GGLGRLAACF120
LDSGATLNYP  LTGYGIRYQF  GIFKQLFIDG  FQVEIGDNWL  EHGDPWSIRK  ASEAITVSFA180
DGDVLAVPYD  TPIIGFGQKT  INTLRLWQAE  ALNKFDFEEF  NHQNYDLSVK  DKNDAENISK240
VLYPNDSNDE  GKLLRLKQQY  FFVSASLQDL  VRKYKEKYQD  HNFDNFAKLH  AVQLNDTHPG300
VAIPEMMRLL  TQQENLSWEK  AWKIVVDTFA  YTNHTLLAEA  LEQWSVKLYQ  ELLPEVYEII360
VKIDQQLREE  LEAKGITKKE  LPQFEIISNG  MIKMAWLSIY  GTKSTNGVAQ  LHTDLLTEVE420
LNHWYKLYPE  RFNNKTNGIT  QRRWLLQSNP  ELSNYITELL  GSDNWITNLE  ELKKLNQVSD480
DKEVLKEFIN  IKQTKKNQLA  DYIKENEGIE  VDPKSIFDIQ  IKRLHEYKRQ  LLKAFYILDL540
YYRLKEDPSL  DIVPRTFIFG  AKAAPGYFRA  KGIIKFINEI  KKLVNNDSEI  NGKIKVVFVE600
NYRVSYAERL  FPAADISEQI  STAGKEASGT  GNMKFMLNGA  PTIGTYDGAN  VEIVEEAGEE660
NNFIFGLRVE  DIAKIENYDP  KAEYVNVKGL  QRVIDSLIDG  TFDDGGTGMF  KELHDSILKG720
ASWHKPDNYY  IVRDFDDYRK  AQLEVDQAFR  EKMTWAKKCW  LNIANAGKFS  SDRTIDQYAK780
EIWGIEKA788

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help