CAZyme3D

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Entry ID

Information for CAZyme ID: QNN59957.1

Basic Information

GenBank IDQNN59957.1
FamilyGH170
Sequence Length362
UniProt IDA0A7G9RWI2(100,100)Download
Average pLDDT?94.92
CAZy50 ID109692
CAZy50 RepNo, AIU03349.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID225084
KingdomBacteria
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyErysipelotrichaceae
GenusErysipelothrix
SpeciesErysipelothrix inopinata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRKLGISIYP  DKSSIEEMKN  YIVKAADAGF  SRIFSCLLSV  DKPREVIKDE  FIEINQFAKE60
HGFEIIVDVS  PKVFADLGIS  YDDLSFFHEI  GADGLRLDAG  FGGSHESLMT  FNPYDLKIEI120
NMSQDIHYID  TIMDYQPNQY  NLIACHNFYP  HPYSGLTEEL  FDSATKRFKK  YGLRTAAFVS180
SQADGAYGPW  PVDDGLVTLE  KHRHLPLHVQ  IKDYIAMNEI  DDIIISNFYP  SDEELAEIKN240
INLTKLNLKV  ELVDSIPEIE  RKIVLEEPHF  NRGDVSAYFK  RSTMSRVKYK  GHDFKIFNAP300
EMIRRGDLII  ESSDFGHYAG  ELQIATQDMK  NTGKSNVVGR  IAEDEVFLID  NIKPWQKFEF360
SL362

Predicted 3D structure by AlphaFold2 with pLDDT = 94.92 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH170(3-360)

MRKLGISIYP  DKSSIEEMKN  YIVKAADAGF  SRIFSCLLSV  DKPREVIKDE  FIEINQFAKE60
HGFEIIVDVS  PKVFADLGIS  YDDLSFFHEI  GADGLRLDAG  FGGSHESLMT  FNPYDLKIEI120
NMSQDIHYID  TIMDYQPNQY  NLIACHNFYP  HPYSGLTEEL  FDSATKRFKK  YGLRTAAFVS180
SQADGAYGPW  PVDDGLVTLE  KHRHLPLHVQ  IKDYIAMNEI  DDIIISNFYP  SDEELAEIKN240
INLTKLNLKV  ELVDSIPEIE  RKIVLEEPHF  NRGDVSAYFK  RSTMSRVKYK  GHDFKIFNAP300
EMIRRGDLII  ESSDFGHYAG  ELQIATQDMK  NTGKSNVVGR  IAEDEVFLID  NIKPWQKFEF360
SL362

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help