CAZyme3D

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Entry ID

Information for CAZyme ID: QNK58588.1

Basic Information

GenBank IDQNK58588.1
FamilyGH163
Sequence Length1186
UniProt IDA0A7G8URU5(100,100)Download
Average pLDDT?84.95
CAZy50 ID6277
CAZy50 RepNo, QNK58589.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2762320
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. PAMC21692

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIRKRFLCWG  MIIMLLFSVV  PSVLAENGST  GLPEEIGMEA  LNTVPNDTGP  KLALVENGES60
RSTIILSQSA  TEQEQKAAQE  LKDYIKQISE  VELPVVSNSI  GVDGIKIYIG  SAAPDLDTAK120
AAIRAEGDEP  DSFRLHVEEG  AINLVGLDDR  DKGSLYAVYE  LLEQMGVRWF  MPGDIGTVVP180
ELETIEVNYQ  DTIQHAGLSF  RFFQATTPYL  WAAGMPMGSN  LEEAAPWVEH  MRLNQKTVGA240
HELLSSPPSR  STRADLYLPN  ADGTPSLHLD  VTKPEVLDMV  VAESLAKMQK  NPNLEYLSIG300
PSDGHVVVLK  PDPEWDGDDR  DVLTGALSTT  DRYIKFFNLV  LEELEKEGYQ  DVKIVFYAYN360
TYYNPPVRWT  PNQRIVPMIA  SLTLDRIHSI  GNPLAWERNY  LKEVIDGWNE  VSPTVMIYDY420
LYNPADPGLP  VSLAERVGTE  YKYFKEHGVI  GIRAETTPEW  GYGGLGLYLA  AKMMWNPDLD480
VDALREDYFT  TFYGPAASPM  KEHFEILENA  FARADYSAGN  IYDFQHILTD  EVMQELARTL540
GEAKAKVASD  SVYAKRIDMI  SIANGFSENF  LEMLEQFNLF  HFDAAKEKLN  NVYDFREQAV600
LHSPAILSSY  KAYTYVEWFF  DRMVNGGKQR  VSNGNQIVAE  LPDEWNVKLF  PNASGVDLGL660
WKPGLGTESW  RKLKTYSKTW  SAQGLRYYKG  HAWYRTTIDI  AEEFDTGKPI  RLWFSSIDET720
ARVWINGEEL  SLVQKGTGLT  KPWEFDATPA  VKFGEPNVIV  VDVRNEDIDE  LGTGGIMGPA780
ILWQVNTELD  YLPPADVKNL  KAVHIPGTTT  VKVTWDIPTD  NTGVTGYQLE  MLNRESVGGV840
LGSVITTTNE  YIDTGMEPGM  ERRYRVKAID  TGGNKSVNYS  AYARVTMNPP  STVTGLKVKQ900
TSANQVYISW  DPSTVYEDFE  IAGYSLEVLN  QNPPGGVLET  IKSSTNAYIL  SGLQPGMTRR960
FRVKAIDTAG  NMSADYSAVV  QITMAENVTP  AGPPTTPTGL  KSEPLANGAM  KLSWDPATSD1020
VGIAKYVLEV  WDVDGGAGQL  MTVEATTNEF  IFTDYFKMGI  VRKIRVLAVD  NAGGQSAVSA1080
FMTLKVPPTK  PTLTVEQISD  TEVKISWTAS  ESVYGMREYV  LELLNPVPPG  GVNKELMRAL1140
ETEFTHTGLE  ADGKTLRYRV  RAIDHYSTAF  PNVSSSDIVE  IIMQPQ1186

Predicted 3D structure by AlphaFold2 with pLDDT = 84.95 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH163(267-502)

MIRKRFLCWG  MIIMLLFSVV  PSVLAENGST  GLPEEIGMEA  LNTVPNDTGP  KLALVENGES60
RSTIILSQSA  TEQEQKAAQE  LKDYIKQISE  VELPVVSNSI  GVDGIKIYIG  SAAPDLDTAK120
AAIRAEGDEP  DSFRLHVEEG  AINLVGLDDR  DKGSLYAVYE  LLEQMGVRWF  MPGDIGTVVP180
ELETIEVNYQ  DTIQHAGLSF  RFFQATTPYL  WAAGMPMGSN  LEEAAPWVEH  MRLNQKTVGA240
HELLSSPPSR  STRADLYLPN  ADGTPSLHLD  VTKPEVLDMV  VAESLAKMQK  NPNLEYLSIG300
PSDGHVVVLK  PDPEWDGDDR  DVLTGALSTT  DRYIKFFNLV  LEELEKEGYQ  DVKIVFYAYN360
TYYNPPVRWT  PNQRIVPMIA  SLTLDRIHSI  GNPLAWERNY  LKEVIDGWNE  VSPTVMIYDY420
LYNPADPGLP  VSLAERVGTE  YKYFKEHGVI  GIRAETTPEW  GYGGLGLYLA  AKMMWNPDLD480
VDALREDYFT  TFYGPAASPM  KEHFEILENA  FARADYSAGN  IYDFQHILTD  EVMQELARTL540
GEAKAKVASD  SVYAKRIDMI  SIANGFSENF  LEMLEQFNLF  HFDAAKEKLN  NVYDFREQAV600
LHSPAILSSY  KAYTYVEWFF  DRMVNGGKQR  VSNGNQIVAE  LPDEWNVKLF  PNASGVDLGL660
WKPGLGTESW  RKLKTYSKTW  SAQGLRYYKG  HAWYRTTIDI  AEEFDTGKPI  RLWFSSIDET720
ARVWINGEEL  SLVQKGTGLT  KPWEFDATPA  VKFGEPNVIV  VDVRNEDIDE  LGTGGIMGPA780
ILWQVNTELD  YLPPADVKNL  KAVHIPGTTT  VKVTWDIPTD  NTGVTGYQLE  MLNRESVGGV840
LGSVITTTNE  YIDTGMEPGM  ERRYRVKAID  TGGNKSVNYS  AYARVTMNPP  STVTGLKVKQ900
TSANQVYISW  DPSTVYEDFE  IAGYSLEVLN  QNPPGGVLET  IKSSTNAYIL  SGLQPGMTRR960
FRVKAIDTAG  NMSADYSAVV  QITMAENVTP  AGPPTTPTGL  KSEPLANGAM  KLSWDPATSD1020
VGIAKYVLEV  WDVDGGAGQL  MTVEATTNEF  IFTDYFKMGI  VRKIRVLAVD  NAGGQSAVSA1080
FMTLKVPPTK  PTLTVEQISD  TEVKISWTAS  ESVYGMREYV  LELLNPVPPG  GVNKELMRAL1140
ETEFTHTGLE  ADGKTLRYRV  RAIDHYSTAF  PNVSSSDIVE  IIMQPQ1186

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help