Information for CAZyme ID: QNJ25337.1
Basic Information
GenBank ID | QNJ25337.1 |
Family | GH116 |
Sequence Length | 833 |
UniProt ID | A0A7G8J439(100,100)![]() |
Average pLDDT? | 94.17 |
CAZy50 ID | 21985 |
CAZy50 Rep | No, QPN64266.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1050714 |
Kingdom | Bacteria |
Phylum | Cyanobacteriota |
Class | Cyanophyceae |
Order | Synechococcales |
Family | Synechococcaceae |
Genus | Synechococcus |
Species | Synechococcus sp. SYN20 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MAPLGLSALR SRLSRGSSAK DWQPPEASWS RSFGLGWQSP FTVRYASNLD DGPWHGMPLG | 60 |
GFGAGCIGRS SRGDFNLWHL DGGEHWYGSI PDCQFALWEQ QGDQVRVHAL ATEPTRDDSR | 120 |
PESGKPLSSW QWYPASTEET STGTYAARYP LSWNHYEGVF RAGVSCEAFS PILPGDYQRS | 180 |
SYPVAVFRWT LSNPTNKPLE LSLLLSWRNT VGWFTNTDSS AEVHFRDDGS PEHNYAPAIG | 240 |
AGEGQRNRWV DGDGLSGVLL DGKRSTPLAE GEGQWCLALP DTLEGVELMR CSRWDPSGDG | 300 |
AELWQPFAAD GVIPDSNNDR ASRKGEHASA AIAVKFTLAP GEIREIPVAI SWDLPVTSFA | 360 |
TGVRDLRRYS DFYGVDGCHA AAIAAEALRD WTSWHEQIEA WQAPVLARKE LPEELRMALF | 420 |
NELYDLASGG SLWTAASSKD PYGRFGVLEC LDYAWYESLD VRLYGSFALL QLWPELDKAV | 480 |
IRSFARAIPA ADATQRPIGW YFTQGRGRVE ADRKVKGATP HDLGAPNEVP FDATNYTAYQ | 540 |
DCNLWKDLAS DYVLQVWRTF KLAPTGEDLG FLAECWPAAV QALHYLKQFD VNDDGLPDNG | 600 |
GAPDQTFDDW PLKGVSAYCG ALWIAALEAA LAMAQRLQLE LGLETGEEQH TFSGWLEQSR | 660 |
ANFDKLLWNG EYYDIDAESG TPVVMADQLC GDFYARLLEL PPVVSEANSR STLKAVKEAC | 720 |
FDNFAGGSLG VANGLRRDGT PLDPNGTHPL EVWTGINFGI ASYYRLMGEG KTAEAICSAV | 780 |
VTQVYSGGLQ FRTPEAITAV NTFRACHYLR AMAIWGLWAT HTDWETIPGA QRA | 833 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.17 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH116(443-816)
MAPLGLSALR SRLSRGSSAK DWQPPEASWS RSFGLGWQSP FTVRYASNLD DGPWHGMPLG | 60 |
GFGAGCIGRS SRGDFNLWHL DGGEHWYGSI PDCQFALWEQ QGDQVRVHAL ATEPTRDDSR | 120 |
PESGKPLSSW QWYPASTEET STGTYAARYP LSWNHYEGVF RAGVSCEAFS PILPGDYQRS | 180 |
SYPVAVFRWT LSNPTNKPLE LSLLLSWRNT VGWFTNTDSS AEVHFRDDGS PEHNYAPAIG | 240 |
AGEGQRNRWV DGDGLSGVLL DGKRSTPLAE GEGQWCLALP DTLEGVELMR CSRWDPSGDG | 300 |
AELWQPFAAD GVIPDSNNDR ASRKGEHASA AIAVKFTLAP GEIREIPVAI SWDLPVTSFA | 360 |
TGVRDLRRYS DFYGVDGCHA AAIAAEALRD WTSWHEQIEA WQAPVLARKE LPEELRMALF | 420 |
NELYDLASGG SLWTAASSKD PYGRFGVLEC LDYAWYESLD VRLYGSFALL QLWPELDKAV | 480 |
IRSFARAIPA ADATQRPIGW YFTQGRGRVE ADRKVKGATP HDLGAPNEVP FDATNYTAYQ | 540 |
DCNLWKDLAS DYVLQVWRTF KLAPTGEDLG FLAECWPAAV QALHYLKQFD VNDDGLPDNG | 600 |
GAPDQTFDDW PLKGVSAYCG ALWIAALEAA LAMAQRLQLE LGLETGEEQH TFSGWLEQSR | 660 |
ANFDKLLWNG EYYDIDAESG TPVVMADQLC GDFYARLLEL PPVVSEANSR STLKAVKEAC | 720 |
FDNFAGGSLG VANGLRRDGT PLDPNGTHPL EVWTGINFGI ASYYRLMGEG KTAEAICSAV | 780 |
VTQVYSGGLQ FRTPEAITAV NTFRACHYLR AMAIWGLWAT HTDWETIPGA QRA | 833 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.