CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: QNJ25337.1

Basic Information

GenBank IDQNJ25337.1
FamilyGH116
Sequence Length833
UniProt IDA0A7G8J439(100,100)Download
Average pLDDT?94.17
CAZy50 ID21985
CAZy50 RepNo, QPN64266.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1050714
KingdomBacteria
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. SYN20

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAPLGLSALR  SRLSRGSSAK  DWQPPEASWS  RSFGLGWQSP  FTVRYASNLD  DGPWHGMPLG60
GFGAGCIGRS  SRGDFNLWHL  DGGEHWYGSI  PDCQFALWEQ  QGDQVRVHAL  ATEPTRDDSR120
PESGKPLSSW  QWYPASTEET  STGTYAARYP  LSWNHYEGVF  RAGVSCEAFS  PILPGDYQRS180
SYPVAVFRWT  LSNPTNKPLE  LSLLLSWRNT  VGWFTNTDSS  AEVHFRDDGS  PEHNYAPAIG240
AGEGQRNRWV  DGDGLSGVLL  DGKRSTPLAE  GEGQWCLALP  DTLEGVELMR  CSRWDPSGDG300
AELWQPFAAD  GVIPDSNNDR  ASRKGEHASA  AIAVKFTLAP  GEIREIPVAI  SWDLPVTSFA360
TGVRDLRRYS  DFYGVDGCHA  AAIAAEALRD  WTSWHEQIEA  WQAPVLARKE  LPEELRMALF420
NELYDLASGG  SLWTAASSKD  PYGRFGVLEC  LDYAWYESLD  VRLYGSFALL  QLWPELDKAV480
IRSFARAIPA  ADATQRPIGW  YFTQGRGRVE  ADRKVKGATP  HDLGAPNEVP  FDATNYTAYQ540
DCNLWKDLAS  DYVLQVWRTF  KLAPTGEDLG  FLAECWPAAV  QALHYLKQFD  VNDDGLPDNG600
GAPDQTFDDW  PLKGVSAYCG  ALWIAALEAA  LAMAQRLQLE  LGLETGEEQH  TFSGWLEQSR660
ANFDKLLWNG  EYYDIDAESG  TPVVMADQLC  GDFYARLLEL  PPVVSEANSR  STLKAVKEAC720
FDNFAGGSLG  VANGLRRDGT  PLDPNGTHPL  EVWTGINFGI  ASYYRLMGEG  KTAEAICSAV780
VTQVYSGGLQ  FRTPEAITAV  NTFRACHYLR  AMAIWGLWAT  HTDWETIPGA  QRA833

Predicted 3D structure by AlphaFold2 with pLDDT = 94.17 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH116(443-816)

MAPLGLSALR  SRLSRGSSAK  DWQPPEASWS  RSFGLGWQSP  FTVRYASNLD  DGPWHGMPLG60
GFGAGCIGRS  SRGDFNLWHL  DGGEHWYGSI  PDCQFALWEQ  QGDQVRVHAL  ATEPTRDDSR120
PESGKPLSSW  QWYPASTEET  STGTYAARYP  LSWNHYEGVF  RAGVSCEAFS  PILPGDYQRS180
SYPVAVFRWT  LSNPTNKPLE  LSLLLSWRNT  VGWFTNTDSS  AEVHFRDDGS  PEHNYAPAIG240
AGEGQRNRWV  DGDGLSGVLL  DGKRSTPLAE  GEGQWCLALP  DTLEGVELMR  CSRWDPSGDG300
AELWQPFAAD  GVIPDSNNDR  ASRKGEHASA  AIAVKFTLAP  GEIREIPVAI  SWDLPVTSFA360
TGVRDLRRYS  DFYGVDGCHA  AAIAAEALRD  WTSWHEQIEA  WQAPVLARKE  LPEELRMALF420
NELYDLASGG  SLWTAASSKD  PYGRFGVLEC  LDYAWYESLD  VRLYGSFALL  QLWPELDKAV480
IRSFARAIPA  ADATQRPIGW  YFTQGRGRVE  ADRKVKGATP  HDLGAPNEVP  FDATNYTAYQ540
DCNLWKDLAS  DYVLQVWRTF  KLAPTGEDLG  FLAECWPAAV  QALHYLKQFD  VNDDGLPDNG600
GAPDQTFDDW  PLKGVSAYCG  ALWIAALEAA  LAMAQRLQLE  LGLETGEEQH  TFSGWLEQSR660
ANFDKLLWNG  EYYDIDAESG  TPVVMADQLC  GDFYARLLEL  PPVVSEANSR  STLKAVKEAC720
FDNFAGGSLG  VANGLRRDGT  PLDPNGTHPL  EVWTGINFGI  ASYYRLMGEG  KTAEAICSAV780
VTQVYSGGLQ  FRTPEAITAV  NTFRACHYLR  AMAIWGLWAT  HTDWETIPGA  QRA833

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help