Information for CAZyme ID: QNH67990.1
Basic Information
GenBank ID | QNH67990.1 |
Family | GT1 |
Sequence Length | 521 |
UniProt ID | A0A7H9SNJ1(100,100)![]() |
Average pLDDT? | 56.27 |
CAZy50 ID | 64513 |
CAZy50 Rep | No, QNH67983.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 10195 |
Kingdom | Eukaryota |
Phylum | Rotifera |
Class | Eurotatoria |
Order | Ploima |
Family | Brachionidae |
Genus | Brachionus |
Species | Brachionus plicatilis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKLFKNKRYG SVETQRTDRV IFLWSVPANG HLNPTLCYAN ELLKALPEMN CSKLVFYSGK | 60 |
SFKDLILNLP NNRGKDLIEF RDYELEKNTG TENLLKLIMN FNTKPGTLFR VFQCYENSIK | 120 |
LGAKHLFQRL IQDMHNDQPV LILYDQALFF PKIACELYSK KYSCAKPLHV SYVTTFMCAR | 180 |
GIYPYWSDLE KMGLLGNNLS KRDKIRTFFI LGNDFFHYLF TYYKTLWWDL HFSFLDLVLR | 240 |
CELPLSQVQM IDQNMNLVFV MPEVQPRLEY FQNKGNIKFV GPSVDEVVRS NISQKKTDMD | 300 |
QYVERIEEFL AANLVNSLGG VKSTFMRSES TGENFKKYHK PIIYVSMGTV FNNENSNLFR | 360 |
ILIEGCKKFS DTYAIIISTG DEKTYQKYAG LYTNDNILLI PHTPQVEILK RTHLFITHAG | 420 |
MNSVSEAMNY GVPIICIPLS GDQPFVAWRV ADELGMGIRL QPDESLTVEK VISSISNILN | 480 |
DPSYRLKAQS LSKLSQNYAG HKTAVEYTIK ALRDHESKML I | 521 |
Predicted 3D structure by AlphaFold2 with pLDDT = 56.27 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT1(339-506)
MKLFKNKRYG SVETQRTDRV IFLWSVPANG HLNPTLCYAN ELLKALPEMN CSKLVFYSGK | 60 |
SFKDLILNLP NNRGKDLIEF RDYELEKNTG TENLLKLIMN FNTKPGTLFR VFQCYENSIK | 120 |
LGAKHLFQRL IQDMHNDQPV LILYDQALFF PKIACELYSK KYSCAKPLHV SYVTTFMCAR | 180 |
GIYPYWSDLE KMGLLGNNLS KRDKIRTFFI LGNDFFHYLF TYYKTLWWDL HFSFLDLVLR | 240 |
CELPLSQVQM IDQNMNLVFV MPEVQPRLEY FQNKGNIKFV GPSVDEVVRS NISQKKTDMD | 300 |
QYVERIEEFL AANLVNSLGG VKSTFMRSES TGENFKKYHK PIIYVSMGTV FNNENSNLFR | 360 |
ILIEGCKKFS DTYAIIISTG DEKTYQKYAG LYTNDNILLI PHTPQVEILK RTHLFITHAG | 420 |
MNSVSEAMNY GVPIICIPLS GDQPFVAWRV ADELGMGIRL QPDESLTVEK VISSISNILN | 480 |
DPSYRLKAQS LSKLSQNYAG HKTAVEYTIK ALRDHESKML I | 521 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.