CAZyme3D

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Entry ID

Information for CAZyme ID: QNG29430.1

Basic Information

GenBank IDQNG29430.1
FamilyGH3
Sequence Length533
UniProt IDA0A7G7KNR5(100,100)Download
Average pLDDT?91.53
CAZy50 ID57243
CAZy50 RepNo, QNI90001.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2751170
KingdomBacteria
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. LTW-R

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MEASELRRQL  ASLLVVRGSG  HARDHQRRYP  RWELSNAQLQ  TLLEQGVGGV  ILLGGSAEEL60
RLRCEQLQRW  ASQPLLLCAD  VEEGVGQRFE  GASWLAPPLA  LGALHARDPE  QAEVLAERYG120
RCTGRQARLL  GLNWVLGPVC  DVNNNPANPV  INVRAWGETP  ESAGALAAAF  IQGCQAEGVL180
ACAKHFPGHG  DTSSDSHLEL  PELPHDRERL  DQIELPPFQR  AVAAGVASVM  TAHLRLPALD240
NAQPATLSEA  VLTGLLRQEL  QFPGLVVTDA  LVMEAISQHH  GSAEAAVLAF  EAGADLILMP300
AEAQEALDGL  VEAVQSGRIS  WERVEASLER  RRAALARCTG  TQEAQQGALD  GLITASERQL360
SGELLAGSLL  RQGTPGLPAG  PGLNLIRLDN  QLNAPQLPLV  APALLRPAAL  GYEARLIDAR420
SPSPWSGDPT  APLALDRLPE  GPVLLQLLVR  GNPFRGSAGG  DEPWPQVVRQ  LLSAGSLAGL480
AVYGSPYLWQ  TLEPLLPPEL  PAAYSPAQMP  QAQALLLEAL  GLPEAALEGG  FTD533

Predicted 3D structure by AlphaFold2 with pLDDT = 91.53 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH3(68-299)

MEASELRRQL  ASLLVVRGSG  HARDHQRRYP  RWELSNAQLQ  TLLEQGVGGV  ILLGGSAEEL60
RLRCEQLQRW  ASQPLLLCAD  VEEGVGQRFE  GASWLAPPLA  LGALHARDPE  QAEVLAERYG120
RCTGRQARLL  GLNWVLGPVC  DVNNNPANPV  INVRAWGETP  ESAGALAAAF  IQGCQAEGVL180
ACAKHFPGHG  DTSSDSHLEL  PELPHDRERL  DQIELPPFQR  AVAAGVASVM  TAHLRLPALD240
NAQPATLSEA  VLTGLLRQEL  QFPGLVVTDA  LVMEAISQHH  GSAEAAVLAF  EAGADLILMP300
AEAQEALDGL  VEAVQSGRIS  WERVEASLER  RRAALARCTG  TQEAQQGALD  GLITASERQL360
SGELLAGSLL  RQGTPGLPAG  PGLNLIRLDN  QLNAPQLPLV  APALLRPAAL  GYEARLIDAR420
SPSPWSGDPT  APLALDRLPE  GPVLLQLLVR  GNPFRGSAGG  DEPWPQVVRQ  LLSAGSLAGL480
AVYGSPYLWQ  TLEPLLPPEL  PAAYSPAQMP  QAQALLLEAL  GLPEAALEGG  FTD533

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help