CAZyme3D

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Entry ID

Information for CAZyme ID: QNE76351.1

Basic Information

GenBank IDQNE76351.1
FamilyGT2
Sequence Length242
UniProt IDA0A7G7BLY6(100,100)Download
Average pLDDT?86.96
CAZy50 ID37172
CAZy50 RepNo, QKW23993.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID67296
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces finlayi

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTDSSPHSSA  VPRADVVLPC  LDEAAALPGV  LSRIPPGWRA  IVVDNGSTDG  SAGLARSLGA60
TVVHEPRRGF  GAACHAGLLA  ATAEYVCFCD  CDGSLDPALL  PSFVRGIAGG  EADLLLGRRR120
PEGKGAWPPH  ARAGNLALAR  MLRRRTGLRL  HDLGPMRAAR  RTDLLALALT  DRRSGYPLQM180
VVRASDAGLR  VAERDVPYLP  RTGKSKVTGT  WRGTWHAVRD  MRAVLRQQPP  GRSVTVHTEA240
TR242

Predicted 3D structure by AlphaFold2 with pLDDT = 86.96 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(16-134)

MTDSSPHSSA  VPRADVVLPC  LDEAAALPGV  LSRIPPGWRA  IVVDNGSTDG  SAGLARSLGA60
TVVHEPRRGF  GAACHAGLLA  ATAEYVCFCD  CDGSLDPALL  PSFVRGIAGG  EADLLLGRRR120
PEGKGAWPPH  ARAGNLALAR  MLRRRTGLRL  HDLGPMRAAR  RTDLLALALT  DRRSGYPLQM180
VVRASDAGLR  VAERDVPYLP  RTGKSKVTGT  WRGTWHAVRD  MRAVLRQQPP  GRSVTVHTEA240
TR242

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help