CAZyme3D

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Entry ID

Information for CAZyme ID: QNE19213.1

Basic Information

GenBank IDQNE19213.1
FamilyCBM11, GH3
Sequence Length1061
UniProt IDA0A7G6WYZ8(100,100)Download
Average pLDDT?91.26
CAZy50 ID2419
CAZy50 RepNo, VEH27113.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1544730
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyKribbellaceae
GenusKribbella
SpeciesKribbella qitaiheensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPRWTAIRPP  RRRTALVTTA  ALLTGLLPFG  IASQAAAVDP  DPIVLAAFEG  AEAFASPPNA60
GIFGWGSDAD  DPPTMEFQAR  ADAPEGEKVL  HGTYNISGYG  GLSHDVTFDQ  NPGDWSAHKG120
IRFWWYGQNT  APLPPGSGKR  IFFEIKDGGA  NAEASELWNT  SFTDDWEGWH  QVEIPFADLN180
YRGDYQPVGG  IDQVLNLTQM  WGYAITMPVG  TPGEFAIDQV  EVYGKADPAL  KASVTTDAGV240
YPVKEGGTAQ  IKVTLGTAGS  TPLEEPVTVD  YRTGTGTAGP  SDYSPVSGTF  TFPAGTPSGT300
SQLVTVTTKK  DKIPEVAETI  PLELTVTGAK  APANPQVVIN  AHDLPYLNSK  LPVKLRVKDL360
LSRMNLAEKV  GQMTQAERNA  LKSKSDIATY  ALGSLLSGGG  SVPTPNTPAG  WAAMIDTFQL420
NAQATRLQVP  LIYGVDAVHG  HNNVIGATIL  PHNIGMGATH  DPDLSRRAGE  VTSTEVRATG480
IPWDFAPCVC  VVRDDRWGRS  YEGISEDPAL  VKAMATVITG  MQGKADGSQL  AQSNHVLATA540
KHYVGDGGTT  YGSSTTGNYK  IDQGITEVTP  QQLEAIHLDP  FKTAVDLGVG  SVMPSYSSVD600
IIGDDQGPVK  MHANAALING  VLKHRMGFDG  FVISDWQAID  QIPGDYPSDI  RTSINAGLDM660
IMVPTNYPDF  ITGLTAEVTA  GRVTPARVDD  AVSRILTQKF  KLGLFEHPYT  DTSNRDQIGS720
AAHRTIAREA  AAKSQVLLKN  DGNLLPLAST  SNIYVAGSNA  NDLGNQMGGW  SITWQGASGN780
TTTGTTILDG  IKQVAPTATF  SQDASAPLEG  HDVGVVVVGE  KPYAEGIGDV  GNNGHTLGLT840
DADKATVSKV  CAAMKCVVLI  VSGRPQVIAD  QLGDIDAVVA  SWLPGTEGAG  VADVLFGKRP900
FTGRLPVTWP  RSEDQEPLNV  GDAAYDPQYP  YGWGLTTQAA  ARRQLATAQK  ELLRKGSRDG960
QALAAVVYIE  LALRVKDWSG  PQAPGALAAL  GQAGKFLQRS  KVDSFSDDDA  VVGAARWIAQ1020
DQIGQNLDEA  TSKLTSDAAH  LSLTGDLSGA  ISKLTVAYKL  H1061

Predicted 3D structure by AlphaFold2 with pLDDT = 91.26 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM11(61-224)+GH3(422-663)

MPRWTAIRPP  RRRTALVTTA  ALLTGLLPFG  IASQAAAVDP  DPIVLAAFEG  AEAFASPPNA60
GIFGWGSDAD  DPPTMEFQAR  ADAPEGEKVL  HGTYNISGYG  GLSHDVTFDQ  NPGDWSAHKG120
IRFWWYGQNT  APLPPGSGKR  IFFEIKDGGA  NAEASELWNT  SFTDDWEGWH  QVEIPFADLN180
YRGDYQPVGG  IDQVLNLTQM  WGYAITMPVG  TPGEFAIDQV  EVYGKADPAL  KASVTTDAGV240
YPVKEGGTAQ  IKVTLGTAGS  TPLEEPVTVD  YRTGTGTAGP  SDYSPVSGTF  TFPAGTPSGT300
SQLVTVTTKK  DKIPEVAETI  PLELTVTGAK  APANPQVVIN  AHDLPYLNSK  LPVKLRVKDL360
LSRMNLAEKV  GQMTQAERNA  LKSKSDIATY  ALGSLLSGGG  SVPTPNTPAG  WAAMIDTFQL420
NAQATRLQVP  LIYGVDAVHG  HNNVIGATIL  PHNIGMGATH  DPDLSRRAGE  VTSTEVRATG480
IPWDFAPCVC  VVRDDRWGRS  YEGISEDPAL  VKAMATVITG  MQGKADGSQL  AQSNHVLATA540
KHYVGDGGTT  YGSSTTGNYK  IDQGITEVTP  QQLEAIHLDP  FKTAVDLGVG  SVMPSYSSVD600
IIGDDQGPVK  MHANAALING  VLKHRMGFDG  FVISDWQAID  QIPGDYPSDI  RTSINAGLDM660
IMVPTNYPDF  ITGLTAEVTA  GRVTPARVDD  AVSRILTQKF  KLGLFEHPYT  DTSNRDQIGS720
AAHRTIAREA  AAKSQVLLKN  DGNLLPLAST  SNIYVAGSNA  NDLGNQMGGW  SITWQGASGN780
TTTGTTILDG  IKQVAPTATF  SQDASAPLEG  HDVGVVVVGE  KPYAEGIGDV  GNNGHTLGLT840
DADKATVSKV  CAAMKCVVLI  VSGRPQVIAD  QLGDIDAVVA  SWLPGTEGAG  VADVLFGKRP900
FTGRLPVTWP  RSEDQEPLNV  GDAAYDPQYP  YGWGLTTQAA  ARRQLATAQK  ELLRKGSRDG960
QALAAVVYIE  LALRVKDWSG  PQAPGALAAL  GQAGKFLQRS  KVDSFSDDDA  VVGAARWIAQ1020
DQIGQNLDEA  TSKLTSDAAH  LSLTGDLSGA  ISKLTVAYKL  H1061

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help