CAZyme3D

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Entry ID

Information for CAZyme ID: QNA76273.1

Basic Information

GenBank IDQNA76273.1
FamilyCBM32, GH55
Sequence Length883
UniProt IDA0A5R9M3W8(100,100)Download
Average pLDDT?90.42
CAZy50 ID19968
CAZy50 RepNo, AXI81283.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2136173
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. So13.3

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRPGGGLRLP  ALLAAAVTIA  SAAVLLPLTS  AHAADSLLSQ  DKTTTASSQE  NYGTPAADAV60
DGDLGTRWSS  ANTDAQWLQV  DLGTVATISK  VQLNWESAYG  KAYQIQTSND  GNTWTTAYST120
TTGTGGNETL  NINGSGRYVR  MNGITRATGY  GYSLWEFQVF  GSLGGPTTPP  TTMPPTTTPP180
TTDCGTADAA  QGKPVTASSE  ENYGTAAANA  VDGNLGTRWS  SANTDSQWLQ  VDLGSSQPLC240
QVVLNWESAY  GKAYQIQTSN  DGKTWTTAYS  TTTGTGGNET  LNINGSGRYV  RMNGITRATG300
YGYSLWELAV  HTGTGSTPTS  TPTPTPTSTP  SGPPVTGGGD  LGPNVLVYDP  STPDLQGKLD360
ALFKQQETAQ  FGPGRYQILL  KPGTYNNLNA  QIGFYTSISG  LGQDPDAVNI  NGDVTVDAGW420
ANGNATLNFW  RSAENMQLNP  VSGTDRWAVA  QAAPFRRMDV  RGGLNLDSAS  YGWASGGFIA480
DSKISGTVGN  YAQQQFYTRD  SSIGGWSNGV  WNQVFSGVQG  APAQGFPNPT  YTTLDTTPIS540
VEKPYLYLDP  SGNYQVFVPS  KRTEARGVSW  ANGHTPGTSL  PLNQFYVVKA  GSTAANINQA600
LSQGLNLLFT  PGIYHVDQSI  NITRPNTVVL  GLGEATIVPD  NGVVPIKVAD  VNGVRVAGLL660
LDAGPVNSPQ  MIQIGTPGST  ADHSADPTVI  SDVFVRIGGA  GPASVGTAME  VNSNNTLIDH720
TWLWRADHGD  GAGWNTNPAT  YGLVVKGNDV  EANGLFAEHF  KKYDVDWFGS  NGKTIFFQNE780
KAYDAPNQAA  IQNGNTLGFA  AYKVENSVSS  HEAWGLGSYC  NYSTDPTIRQ  DHGFEVPVVP840
GVKMHDLSVV  SLGGNGEYNH  VINDIGAATV  GTGTTPSTVT  NFP883

Predicted 3D structure by AlphaFold2 with pLDDT = 90.42 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM32(42-158)+CBM32(196-309)+GH55(568-825)

MRPGGGLRLP  ALLAAAVTIA  SAAVLLPLTS  AHAADSLLSQ  DKTTTASSQE  NYGTPAADAV60
DGDLGTRWSS  ANTDAQWLQV  DLGTVATISK  VQLNWESAYG  KAYQIQTSND  GNTWTTAYST120
TTGTGGNETL  NINGSGRYVR  MNGITRATGY  GYSLWEFQVF  GSLGGPTTPP  TTMPPTTTPP180
TTDCGTADAA  QGKPVTASSE  ENYGTAAANA  VDGNLGTRWS  SANTDSQWLQ  VDLGSSQPLC240
QVVLNWESAY  GKAYQIQTSN  DGKTWTTAYS  TTTGTGGNET  LNINGSGRYV  RMNGITRATG300
YGYSLWELAV  HTGTGSTPTS  TPTPTPTSTP  SGPPVTGGGD  LGPNVLVYDP  STPDLQGKLD360
ALFKQQETAQ  FGPGRYQILL  KPGTYNNLNA  QIGFYTSISG  LGQDPDAVNI  NGDVTVDAGW420
ANGNATLNFW  RSAENMQLNP  VSGTDRWAVA  QAAPFRRMDV  RGGLNLDSAS  YGWASGGFIA480
DSKISGTVGN  YAQQQFYTRD  SSIGGWSNGV  WNQVFSGVQG  APAQGFPNPT  YTTLDTTPIS540
VEKPYLYLDP  SGNYQVFVPS  KRTEARGVSW  ANGHTPGTSL  PLNQFYVVKA  GSTAANINQA600
LSQGLNLLFT  PGIYHVDQSI  NITRPNTVVL  GLGEATIVPD  NGVVPIKVAD  VNGVRVAGLL660
LDAGPVNSPQ  MIQIGTPGST  ADHSADPTVI  SDVFVRIGGA  GPASVGTAME  VNSNNTLIDH720
TWLWRADHGD  GAGWNTNPAT  YGLVVKGNDV  EANGLFAEHF  KKYDVDWFGS  NGKTIFFQNE780
KAYDAPNQAA  IQNGNTLGFA  AYKVENSVSS  HEAWGLGSYC  NYSTDPTIRQ  DHGFEVPVVP840
GVKMHDLSVV  SLGGNGEYNH  VINDIGAATV  GTGTTPSTVT  NFP883

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help