CAZyme3D

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Entry ID

Information for CAZyme ID: QNA71508.1

Basic Information

GenBank IDQNA71508.1
FamilyCBM51, GH27
Sequence Length713
UniProt IDA0A5R9M476(100,100)Download
Average pLDDT?91.52
CAZy50 ID36352
CAZy50 RepNo, AVZ74216.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2136173
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. So13.3

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MQPERHTIRQ  RLAALAASLA  LITGGGVLAA  TAAVTVQLAT  AAPAAAVDNG  LALTPQMGFN60
NWNSTHCRAE  FNETMVKGIA  DIFVSQGLKS  AGYSYVNIDD  CWALPNRDGA  GNLVPDPARF120
PNGIKAVADY  VHSKGLKFGL  YSSAGTKTCD  TLGFPGGLGH  EQQDANLWAS  WGVDYLKYDN180
CNNTGADAQT  RYKAMGDALK  ATGRPILYSI  CEWGSNQPWN  WAANVGNSWR  TTGDISDSWS240
SMIGIAHQNQ  SLAPYAKPGA  WNDPDMLEVG  NGGMTDTEYR  THFSLWSQMA  APLLIGSDLR300
SASAATLAIL  KNTDVIAVDQ  DSLGKQGTVV  SSSGGKVVMT  KALAGGDRSV  TLTNENGSAQ360
TISTTAEAAG  IGGASSYALK  DLWSKQTSST  TGTISASVPA  HGTVMFRVTP  GSPVPPPTGI420
NQLSDLPWTS  ATNGWGPVER  DHSNGEQAAG  DGRTLTINGT  TYAKGLGTHA  PSEISYYLGG480
SCRSVNVDVG  VDDEVSSPGT  VIFQLYKDGT  KVADSGVRSA  SDGPKHLTAD  LTGGSQLKLV540
VTDGGDGINY  DHADWADAKL  ACGNGPAAGT  SALSDLNWTS  AANGWGPVER  DHSNGEQPAG600
DGRTLTINGA  TYAKGLGTHA  ASAVTYYLGG  TCTSLTTDVG  VDDESATNGS  VVFQIFRDGT660
KVADSGLVTV  SDAAKHLTAD  LTGGLELKLV  VTDGGNGNTS  DHADWALPRL  TCG713

Predicted 3D structure by AlphaFold2 with pLDDT = 91.52 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH27(155-387)+CBM51(422-560)+CBM51(572-710)

MQPERHTIRQ  RLAALAASLA  LITGGGVLAA  TAAVTVQLAT  AAPAAAVDNG  LALTPQMGFN60
NWNSTHCRAE  FNETMVKGIA  DIFVSQGLKS  AGYSYVNIDD  CWALPNRDGA  GNLVPDPARF120
PNGIKAVADY  VHSKGLKFGL  YSSAGTKTCD  TLGFPGGLGH  EQQDANLWAS  WGVDYLKYDN180
CNNTGADAQT  RYKAMGDALK  ATGRPILYSI  CEWGSNQPWN  WAANVGNSWR  TTGDISDSWS240
SMIGIAHQNQ  SLAPYAKPGA  WNDPDMLEVG  NGGMTDTEYR  THFSLWSQMA  APLLIGSDLR300
SASAATLAIL  KNTDVIAVDQ  DSLGKQGTVV  SSSGGKVVMT  KALAGGDRSV  TLTNENGSAQ360
TISTTAEAAG  IGGASSYALK  DLWSKQTSST  TGTISASVPA  HGTVMFRVTP  GSPVPPPTGI420
NQLSDLPWTS  ATNGWGPVER  DHSNGEQAAG  DGRTLTINGT  TYAKGLGTHA  PSEISYYLGG480
SCRSVNVDVG  VDDEVSSPGT  VIFQLYKDGT  KVADSGVRSA  SDGPKHLTAD  LTGGSQLKLV540
VTDGGDGINY  DHADWADAKL  ACGNGPAAGT  SALSDLNWTS  AANGWGPVER  DHSNGEQPAG600
DGRTLTINGA  TYAKGLGTHA  ASAVTYYLGG  TCTSLTTDVG  VDDESATNGS  VVFQIFRDGT660
KVADSGLVTV  SDAAKHLTAD  LTGGLELKLV  VTDGGNGNTS  DHADWALPRL  TCG713

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help