CAZyme3D

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Entry ID

Information for CAZyme ID: QMW92127.1

Basic Information

GenBank IDQMW92127.1
FamilyGT2
Sequence Length702
UniProt IDA0A7G5NZ34(100,100)Download
Average pLDDT?87.17
CAZy50 ID37796
CAZy50 RepNo, AJD30095.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1492
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium butyricum
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A7G5NZ34.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKLSIAMIVK  NEEKNIERTL  IPLKQLGNYA  NIEIVIVDTG  STDRTIEIAK  QYTDKIYFQK60
WNDNFADMRN  VSIKYCTGDW  ILILDADEVL  YDIRELAKLI  NGEILDKFNS  VFIKIIDFNK120
NVEYSIKNSS  ISPIMRLFKN  DGIKYEGLVH  EQPKYKEPIL  DSSVRFIHYG  YDNSDSKLME180
YKFNRNLKLL  LEELKNEPEN  IYTNFQIATT  YLMHNDVIQG  EKYIEIAYKL  AKDELRKNIY240
VLDKYCLILY  KLGKYEILVE  KSKEAINYCD  DFLDFYFYLG  SGLYSLNKYE  EASKAYEKYL300
EIYYKKNLTF  NATMSISTKL  YKNSIMYNLS  TCYYKLSMHE  QALETMLSIK  DIELIKSSAL360
MMFKILVEGK  LYNRFECINE  FVDKYNYESI  LIYTERHILL  EELEYISNLE  LKDRIKEIIT420
VVKYFKINKN  LNEILIEKIK  NRIKIDRTPY  SIYVYYLVKN  DANIIKELIT  YGRENMQGVI480
FGLCKLYYDF  NEIMLENLNV  LKSENLNECL  VKITMQRGVL  LSGNLAEDKK  KDLFLNYIAE540
RYCYMLQVYR  IEIIKEEKYI  LSDEDKFIFE  IKNSLSLKYI  DKLEYIKKLK  SILNVEKTYV600
DYIKFLVENN  EDYNVDKSIK  ELIPQLLISI  KNLIKIEDYQ  KAYENIEEAL  SLVKFDFELM660
ILKYNLLIMF  NYTSEAEECL  RDIILYGDED  NVIGFINGDY  EI702

Predicted 3D structure by AlphaFold2 with pLDDT = 87.17 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(4-100)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help