CAZyme3D

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Entry ID

Information for CAZyme ID: QLL97088.1

Basic Information

GenBank IDQLL97088.1
FamilyCBM40, GH33
Sequence Length1130
UniProt IDA0A7H9FGM2(100,100)Download
Average pLDDT?74.66
CAZy50 ID1771
CAZy50 RepNo, CBJ21850.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1891914
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus oralis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNYKSLDRKQ  RYGIRKFAVG  AASVVIGTVV  FGANPVLAQE  QANAAGANTE  TVEPGQGLSE60
LPKEVSSGDL  AHLDKDLADK  LAAAQDNGVV  VDQDHLKKNE  SAESETPSST  ETPAEEANKE120
EESEDQGAIP  RDYYSRDLKN  ANPVLEKEDV  ETNAANGQRV  DLSSELDKLK  QLQNATVHME180
FKPDASSPRF  YNLFSVSSET  KENEYFTMSV  LDNTALIEGR  GANGEQFYDK  YTDAPLKVRP240
GQWNSVTFTV  EQPTAELPHG  RVRLYVNGVL  SRTSLKSGNF  IKDMPDVNQA  QLGATKRGNK300
TVWASNLQVR  NLTVYDRALS  PDEVQTRSQL  FERGDLEQKL  PEGAKVTEKE  DVFEGGMHNQ360
PNKDGIKSYR  IPALLKTDKG  TLIAGADERR  LHSSDWGDIG  MVIRRSEDNG  KTWSDRVTIT420
NLRDNPRASD  PSIGSPVNID  MTLTQDPETK  RIFAIYDMFP  EGKGIFGMSS  QKEEAYKEID480
GKTYQILYRE  GERGAYTIRE  NGTVYTPDGK  ATEYRVVVDP  VKPAYSDKGD  LYRGDQLLGN540
IYFTTNKTSP  FRIAKDSYLW  MSYSDDDGKT  WSAPQDITPM  VKADWMKFLG  VGPGVGITLR600
TGPHKGRIVV  PVYTTNRTNH  LNGSQSSRII  YSDDHGKTWH  MGGGVNDNRT  LYDGTVVDSS660
TMSNYYAQNT  EASVVQLNNG  DLKLFMRGLT  GDLQVATSHD  GGLTWDNNVE  RYDVPDVYVQ720
MAATHTVQNG  KEYILLANAN  GPGRKNGYIR  VARVEEDGQL  TWLHHHLIQE  GEYAYNSLQQ780
IGPDEFGLLY  EHHAPGGVPY  TLSFKKFNWD  FLSKDRISPK  EAKVKYAIQK  WPGIIAMEFD840
SEVLVNKAPT  LQLANGKTAT  FMTQYDTKTL  LFTVDPEDMG  QRITGLAEGE  IESMHNLPVS900
LAGSKLSDGI  NGSEAAINEV  PEFAGGVNAE  EAAVTEVPEY  TGLMATVGEE  AAPTVEKPEF960
TGGINAEEAP  VAEIPEYTGP  LATVGEEAAP  TVEKPEFTGG  VNAVEAAVHE  LPEFKGGVNA1020
VLAASNELPE  YRGGANFVLA  ASNDLPEYKG  GVNGAEAAVH  ELPEYKGETK  PVLAAANDKL1080
SLGQDVTYQA  PAAKQDELPN  TGSKETNSLI  SLGLAGVLLS  LFAFGKKRKE  1130

Predicted 3D structure by AlphaFold2 with pLDDT = 74.66 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM40(147-330)+GH33(358-794)

MNYKSLDRKQ  RYGIRKFAVG  AASVVIGTVV  FGANPVLAQE  QANAAGANTE  TVEPGQGLSE60
LPKEVSSGDL  AHLDKDLADK  LAAAQDNGVV  VDQDHLKKNE  SAESETPSST  ETPAEEANKE120
EESEDQGAIP  RDYYSRDLKN  ANPVLEKEDV  ETNAANGQRV  DLSSELDKLK  QLQNATVHME180
FKPDASSPRF  YNLFSVSSET  KENEYFTMSV  LDNTALIEGR  GANGEQFYDK  YTDAPLKVRP240
GQWNSVTFTV  EQPTAELPHG  RVRLYVNGVL  SRTSLKSGNF  IKDMPDVNQA  QLGATKRGNK300
TVWASNLQVR  NLTVYDRALS  PDEVQTRSQL  FERGDLEQKL  PEGAKVTEKE  DVFEGGMHNQ360
PNKDGIKSYR  IPALLKTDKG  TLIAGADERR  LHSSDWGDIG  MVIRRSEDNG  KTWSDRVTIT420
NLRDNPRASD  PSIGSPVNID  MTLTQDPETK  RIFAIYDMFP  EGKGIFGMSS  QKEEAYKEID480
GKTYQILYRE  GERGAYTIRE  NGTVYTPDGK  ATEYRVVVDP  VKPAYSDKGD  LYRGDQLLGN540
IYFTTNKTSP  FRIAKDSYLW  MSYSDDDGKT  WSAPQDITPM  VKADWMKFLG  VGPGVGITLR600
TGPHKGRIVV  PVYTTNRTNH  LNGSQSSRII  YSDDHGKTWH  MGGGVNDNRT  LYDGTVVDSS660
TMSNYYAQNT  EASVVQLNNG  DLKLFMRGLT  GDLQVATSHD  GGLTWDNNVE  RYDVPDVYVQ720
MAATHTVQNG  KEYILLANAN  GPGRKNGYIR  VARVEEDGQL  TWLHHHLIQE  GEYAYNSLQQ780
IGPDEFGLLY  EHHAPGGVPY  TLSFKKFNWD  FLSKDRISPK  EAKVKYAIQK  WPGIIAMEFD840
SEVLVNKAPT  LQLANGKTAT  FMTQYDTKTL  LFTVDPEDMG  QRITGLAEGE  IESMHNLPVS900
LAGSKLSDGI  NGSEAAINEV  PEFAGGVNAE  EAAVTEVPEY  TGLMATVGEE  AAPTVEKPEF960
TGGINAEEAP  VAEIPEYTGP  LATVGEEAAP  TVEKPEFTGG  VNAVEAAVHE  LPEFKGGVNA1020
VLAASNELPE  YRGGANFVLA  ASNDLPEYKG  GVNGAEAAVH  ELPEYKGETK  PVLAAANDKL1080
SLGQDVTYQA  PAAKQDELPN  TGSKETNSLI  SLGLAGVLLS  LFAFGKKRKE  1130

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help