CAZyme3D

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Entry ID

Information for CAZyme ID: QLD27892.1

Basic Information

GenBank IDQLD27892.1
FamilyGH81
Sequence Length982
UniProt IDA0A7H8XVA8(100,100)Download
Average pLDDT?91.22
CAZy50 ID6235
CAZy50 RepNo, UUI74322.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID47853
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora carbonacea

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MEAPVTPPTP  HRRRLWALVS  STVLALATGG  LAVAVDTAPA  QAASVGAGSY  TTTPVGPLPA60
GCGQLSTNPR  QYVTADAPAG  AVPTNDWWSS  LLFKRTDCAF  SEPLHAHPLS  YDTFTDGLGF120
SANSTPAISG  TATGVGEFHY  PYTQDIRVGV  AGLAAPTVKV  AGWTDWTVTP  YWSDGARTLR180
ATIGHGLPFA  YFQATGGDAV  VNASSTPTVW  SNSGATIGFT  VAGHDYVAYA  PSGASWTVSG240
GRISSTLAGK  GYFSVALLPT  TAGSTAAERT  SLAATYGRYA  HAHVTGTRVS  YAYDQAASRL300
TTTYAFTTTA  REGTATQTVV  SLYPHQWKAL  TGSTPLTQTY  PSARGRMKVL  TGVTQFRTAM360
TYHGVLPELP  AVGDGSGADL  ATLRDQLAAV  RGNPMDQRGG  DTYWTGKGLG  RAARIAEVAD420
LVDDTATRDS  ALNAIRSTLT  DWFTASPGKT  AKVFYYDQNW  GTLIGYPASY  GSDQELNDHH480
FHYGYFIAAA  ATLAKFDPQW  ATDARYGGMV  DLLIRDADNY  DRNDTRFPYL  RDFDIYAGHD540
WASGHGSFGA  GNNQESSSEG  MNFANALIQW  GQATGDTAVR  DAGIFLYTTQ  AAAIQEYWFD600
HADENFPAGF  GHSTVGMVWG  DGGAYATWFS  ADPEMIQGIN  LLPVTGGHLY  LGYDPAYVRT660
NYAELVRNNN  GQPTVWQDIL  WQFQALGDAG  TALSNLRANP  GYTPEEGESR  AHTFHWIRNL720
AALGTVDTTV  TANHPLSAVF  TRNGARTYVA  SNITAAPITV  RFSDGVTLTV  GAGRTATTGA780
YTWSGGNAAG  GVPPTGTPSP  TPTASPTPTP  TPTPTSSPSP  SPTATPPAGS  PTRYLLAGGG840
LGAAGGAGTT  TVAAANGNHD  GTPTNAQVFT  ATGLNLAYAG  GQTAFDLFLD  AGTAVGNGVQ900
VRLSYDLTGN  GSWERVETYR  YFATDPVPGY  EHYTQAAGLQ  SSSGTLGNLA  NGTVKVEVWS960
AIGGSPSTLG  LGNQSVVKLP  YS982

Predicted 3D structure by AlphaFold2 with pLDDT = 91.22 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH81(68-716)

MEAPVTPPTP  HRRRLWALVS  STVLALATGG  LAVAVDTAPA  QAASVGAGSY  TTTPVGPLPA60
GCGQLSTNPR  QYVTADAPAG  AVPTNDWWSS  LLFKRTDCAF  SEPLHAHPLS  YDTFTDGLGF120
SANSTPAISG  TATGVGEFHY  PYTQDIRVGV  AGLAAPTVKV  AGWTDWTVTP  YWSDGARTLR180
ATIGHGLPFA  YFQATGGDAV  VNASSTPTVW  SNSGATIGFT  VAGHDYVAYA  PSGASWTVSG240
GRISSTLAGK  GYFSVALLPT  TAGSTAAERT  SLAATYGRYA  HAHVTGTRVS  YAYDQAASRL300
TTTYAFTTTA  REGTATQTVV  SLYPHQWKAL  TGSTPLTQTY  PSARGRMKVL  TGVTQFRTAM360
TYHGVLPELP  AVGDGSGADL  ATLRDQLAAV  RGNPMDQRGG  DTYWTGKGLG  RAARIAEVAD420
LVDDTATRDS  ALNAIRSTLT  DWFTASPGKT  AKVFYYDQNW  GTLIGYPASY  GSDQELNDHH480
FHYGYFIAAA  ATLAKFDPQW  ATDARYGGMV  DLLIRDADNY  DRNDTRFPYL  RDFDIYAGHD540
WASGHGSFGA  GNNQESSSEG  MNFANALIQW  GQATGDTAVR  DAGIFLYTTQ  AAAIQEYWFD600
HADENFPAGF  GHSTVGMVWG  DGGAYATWFS  ADPEMIQGIN  LLPVTGGHLY  LGYDPAYVRT660
NYAELVRNNN  GQPTVWQDIL  WQFQALGDAG  TALSNLRANP  GYTPEEGESR  AHTFHWIRNL720
AALGTVDTTV  TANHPLSAVF  TRNGARTYVA  SNITAAPITV  RFSDGVTLTV  GAGRTATTGA780
YTWSGGNAAG  GVPPTGTPSP  TPTASPTPTP  TPTPTSSPSP  SPTATPPAGS  PTRYLLAGGG840
LGAAGGAGTT  TVAAANGNHD  GTPTNAQVFT  ATGLNLAYAG  GQTAFDLFLD  AGTAVGNGVQ900
VRLSYDLTGN  GSWERVETYR  YFATDPVPGY  EHYTQAAGLQ  SSSGTLGNLA  NGTVKVEVWS960
AIGGSPSTLG  LGNQSVVKLP  YS982

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help