CAZyme3D

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Entry ID

Information for CAZyme ID: QKX62258.1

Basic Information

GenBank IDQKX62258.1
FamilyGH16_18
Sequence Length364
UniProt IDA0A7H8R8M2(100,100)Download
Average pLDDT?77.23
CAZy50 ID78804
CAZy50 RepNo, BCS28490.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID121627
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyTrichocomaceae
GenusTalaromyces
SpeciesTalaromyces rugulosus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPFFPKLAVA  ALAAASLVAG  QTYTDCDPLN  KTCPSDSGLS  SYSFFSDFTS  GDSAFDSWNT60
TAGTVNSTSQ  GAAFIINEKG  DAPTIESNFY  FFFGYVEVKM  KIASGTGIIS  SIVFESDDLD120
EIDWEGIGTY  NYEIETNYFG  KDNTTLYNRA  TYPNVTTPSD  TFHTYAVNWT  SSSIEWFIDD180
VLVRTLYYED  ALDGKNFPQT  PMTLRIGIWA  GGDSDNGEGT  IEWAGGETDY  TEGPFTMYVE240
SVKIINYNPA  DSYTYGDTTG  DYTSIEQSNS  TSSSSSSSSS  SSSSSTSTSI  SSGTPSSGGS300
TNAVGTATTT  PTPATTPTSS  NYTTTSAASA  SASSTTFTAA  AAGMFGSAVS  PAVVLMSAAL360
VFFM364

Predicted 3D structure by AlphaFold2 with pLDDT = 77.23 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH16_18(70-226)

MPFFPKLAVA  ALAAASLVAG  QTYTDCDPLN  KTCPSDSGLS  SYSFFSDFTS  GDSAFDSWNT60
TAGTVNSTSQ  GAAFIINEKG  DAPTIESNFY  FFFGYVEVKM  KIASGTGIIS  SIVFESDDLD120
EIDWEGIGTY  NYEIETNYFG  KDNTTLYNRA  TYPNVTTPSD  TFHTYAVNWT  SSSIEWFIDD180
VLVRTLYYED  ALDGKNFPQT  PMTLRIGIWA  GGDSDNGEGT  IEWAGGETDY  TEGPFTMYVE240
SVKIINYNPA  DSYTYGDTTG  DYTSIEQSNS  TSSSSSSSSS  SSSSSTSTSI  SSGTPSSGGS300
TNAVGTATTT  PTPATTPTSS  NYTTTSAASA  SASSTTFTAA  AAGMFGSAVS  PAVVLMSAAL360
VFFM364

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help