CAZyme3D

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Entry ID

Information for CAZyme ID: QKW59946.1

Basic Information

GenBank IDQKW59946.1
FamilyGH3
Sequence Length798
UniProt IDA0A7H8NZU8(100,100)Download
Average pLDDT?94.08
CAZy50 ID18359
CAZy50 RepNo, AVT38161.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2742134
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. NA03103

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNANVAEENE  NTTTVPLWND  TTASITARVD  ALVAAMTLAE  KTAQLYGVWV  GASDEGDEVA60
PHQHDMEEAV  DLDALVPTGL  GQLTRPFGTV  PVDPALGALS  LARTQTRIAS  GNRFGIPALA120
HDECLAGFSA  WGATAYPVPL  SWGATFDPDL  VERMAAAIGR  DMRAVGVHQG  LAPVLDVVRD180
ARWGRVEETI  GEDPYLVGTV  GTAYVRGLES  AGIVATLKHF  AGYSASRAGR  NLAPCSVGPR240
ERADVLLPPF  EMAIREGGAR  SVMNAYTDTD  GVPSAADEDL  LTGLLRDTWG  FDGTVVADYF300
AIAFLRTLHG  VAADWAGAAG  LALGAGVDVE  LPNVRTYGAP  LAEAVADGRV  PEALVDRAVR360
RTLTQKARLG  MLDPDWNPVP  AALEGADLDR  PEALRGRIDL  DGPENRQLAR  TIAQEAVVLL420
SNDGTLPLGR  PRRIALLGPN  ADEPTAVLGC  YSFPQHIGVR  HPGTPHGIEL  PTLRDTLAAE480
FPEAEITFSR  GTGIDDGELT  GIPEAARVAR  EADIALVVLG  DRAGLFGRGT  SGEGCDAETL540
ALPGAQQQLL  DALLDQETPV  VTVLLAGRPY  ALGRAVGEGA  AIVQSFFPGE  EGTHAIAGVL600
SGRVNPSGRL  PVSVPSGPGS  QPATYLGARL  AHAGAVSNVD  PTPAFAFGHG  LSYTRFDWTD660
LAVEVREAPT  DGEFRLAFTV  RNTGERSGTE  VVQLYLHDPV  ASVVQPVQRL  VGHARVDLEP720
GEAVRLRATV  PADLASFTGR  DGRRVVEPGE  LELRLAASSA  DHRLVAGVRL  TGTARYPDHT780
RRLRSVIVRE  RDHPPGAA798

Predicted 3D structure by AlphaFold2 with pLDDT = 94.08 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH3(110-332)

MNANVAEENE  NTTTVPLWND  TTASITARVD  ALVAAMTLAE  KTAQLYGVWV  GASDEGDEVA60
PHQHDMEEAV  DLDALVPTGL  GQLTRPFGTV  PVDPALGALS  LARTQTRIAS  GNRFGIPALA120
HDECLAGFSA  WGATAYPVPL  SWGATFDPDL  VERMAAAIGR  DMRAVGVHQG  LAPVLDVVRD180
ARWGRVEETI  GEDPYLVGTV  GTAYVRGLES  AGIVATLKHF  AGYSASRAGR  NLAPCSVGPR240
ERADVLLPPF  EMAIREGGAR  SVMNAYTDTD  GVPSAADEDL  LTGLLRDTWG  FDGTVVADYF300
AIAFLRTLHG  VAADWAGAAG  LALGAGVDVE  LPNVRTYGAP  LAEAVADGRV  PEALVDRAVR360
RTLTQKARLG  MLDPDWNPVP  AALEGADLDR  PEALRGRIDL  DGPENRQLAR  TIAQEAVVLL420
SNDGTLPLGR  PRRIALLGPN  ADEPTAVLGC  YSFPQHIGVR  HPGTPHGIEL  PTLRDTLAAE480
FPEAEITFSR  GTGIDDGELT  GIPEAARVAR  EADIALVVLG  DRAGLFGRGT  SGEGCDAETL540
ALPGAQQQLL  DALLDQETPV  VTVLLAGRPY  ALGRAVGEGA  AIVQSFFPGE  EGTHAIAGVL600
SGRVNPSGRL  PVSVPSGPGS  QPATYLGARL  AHAGAVSNVD  PTPAFAFGHG  LSYTRFDWTD660
LAVEVREAPT  DGEFRLAFTV  RNTGERSGTE  VVQLYLHDPV  ASVVQPVQRL  VGHARVDLEP720
GEAVRLRATV  PADLASFTGR  DGRRVVEPGE  LELRLAASSA  DHRLVAGVRL  TGTARYPDHT780
RRLRSVIVRE  RDHPPGAA798

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help