CAZyme3D

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Entry ID

Information for CAZyme ID: QKW46168.1

Basic Information

GenBank IDQKW46168.1
FamilyGH29
Sequence Length382
UniProt IDA0A6N9V737(100,100)Download
Average pLDDT?92.62
CAZy50 ID67905
CAZy50 RepNo, UDY34682.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1919
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces microflavus
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A6N9V737.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVASWWSRAR  LGIFVHWTPA  SVPGWAPPYV  PPSELPTAGR  RAPLGWTSYA  EWYENSLRFP60
GSPAAAHHRA  TYGTRPYTDF  GHDFEDGLSG  WDPAAWARSF  REAGAGYAVL  VTKHHDGFCL120
WPSETKNPHR  TGWHTTRDVV  GEFAEAVRAE  GLRFGVYYSG  GLDWTFDDRP  IGTAADMFSA180
VPRGRYPAYA  DAQLRELIRR  YRPDILWNDI  AWPAAATGIR  SLTDFYRFTV  PHGVVNDRLL240
PYAPHWRALG  LPGAKSLYNW  WDRRTVAQGE  GFVPRTPPDF  DFRTPEYARY  TGSDPYEITR300
GIDHSFGYNR  NSGPDAFIDR  RALTSLVRDT  AADGGNLLLN  VGPRGEDATI  PAEQQLRLGW360
LAEETASGSL  TPERTPGRSA  PE382

Predicted 3D structure by AlphaFold2 with pLDDT = 92.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH29(3-358)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help