CAZyme3D

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Entry ID

Information for CAZyme ID: QKW45694.1

Basic Information

GenBank IDQKW45694.1
FamilyCBM11, GH3
Sequence Length1032
UniProt IDA0A7H8MU90(100,100)Download
Average pLDDT?91.29
CAZy50 ID2419
CAZy50 RepNo, VEH27113.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1919
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces microflavus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPPTPYSRPR  KGRSRPATAA  LAAAAVLATL  LAGAAPSQAA  ADDPAPVLVD  RFEGEVPLGN60
NPPADAIFTW  GGDADDHPQL  KLAERADAPE  GEQVLEGSYD  ISAYGGFSHE  FAVDTPPRNW120
TAHKGIRFWW  YGQNTAPLPP  GSGKRIHFEI  KDGGANGGAS  ELWTTSFTDD  WEGWQLVEIP180
FADFVYRADY  QPVGGIDQIL  GLNEMWGYAF  TMPGGAPGTF  ALDAVELYGK  ADPALTASVV240
TDTAVRPVKN  GAGADLTLSV  ATTGSVPTEE  PVTVTYATKG  GTAVAGKDYT  PVTGSHTFPA300
GTASGTTHKV  TVRTAKASKP  AEAKTIPLEL  TVTGAKAPKE  NPQVVIDAHG  LPYQNAKLPV360
KQRVADLLSR  LSPAEKAGQM  TQAERNALRA  PGDIAAYDLG  SLLSGGGSVP  TPNTAAAWAK420
MVDAYQLRAQ  ATRFQIPLIY  GVDAVHGHNN  VVGATIMPHN  IGIGAGRDPK  SAERTGAITA480
KEVRSTGVPW  DFAPCVCVTR  DERWGRSYEA  FGEDPALVEA  METVIQGMQG  APSGKDLHRN540
DKVLGSAKHF  VGDGGTEYGS  ATTGSYTIDQ  GITKVTRQEL  EAVHLSPFAE  SVKRGVGTIM600
PSYSSLDILG  DDQGPVKMHA  NAEMINGVLK  DRMGFEGFVI  SDWQAIDQIP  GDYPSDVRTS660
INAGLDMIMV  PTAYQEFTKT  LKDEVAAGRI  SEARIDDAVS  RILTQKFRLG  LFEKPYADTT720
HLDKVGSAEH  RAVAREAVAK  SQVLLKNEGA  VLPLEPDQKV  YVAGSNADDI  GNQAGGWTIS780
WQGSSGKTTP  GTTILEGMKK  AAKTPESVTY  SKDASAATDG  YDVGVVVVGE  TPYAEGIGDV840
GNGHDLVLTA  ADKAAVDKVC  AAMKCAVLIV  SGRPQLVGDQ  LGKINALVAS  WLPGSEGDGV900
ADVLYGKRAF  TGQLPVTWPK  SEAQVPINVG  DATYDPQFPY  GWGLTTLKKP  PAGGELTLAA960
LALAAQVAEK  AHLGKTPAGK  AIVDQARLLV  QQKINGKFTQ  AVSKPFAEAD  HLLLTGDLTG1020
AVAKLRTAYR  AA1032

Predicted 3D structure by AlphaFold2 with pLDDT = 91.29 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM11(66-229)+GH3(429-670)

MPPTPYSRPR  KGRSRPATAA  LAAAAVLATL  LAGAAPSQAA  ADDPAPVLVD  RFEGEVPLGN60
NPPADAIFTW  GGDADDHPQL  KLAERADAPE  GEQVLEGSYD  ISAYGGFSHE  FAVDTPPRNW120
TAHKGIRFWW  YGQNTAPLPP  GSGKRIHFEI  KDGGANGGAS  ELWTTSFTDD  WEGWQLVEIP180
FADFVYRADY  QPVGGIDQIL  GLNEMWGYAF  TMPGGAPGTF  ALDAVELYGK  ADPALTASVV240
TDTAVRPVKN  GAGADLTLSV  ATTGSVPTEE  PVTVTYATKG  GTAVAGKDYT  PVTGSHTFPA300
GTASGTTHKV  TVRTAKASKP  AEAKTIPLEL  TVTGAKAPKE  NPQVVIDAHG  LPYQNAKLPV360
KQRVADLLSR  LSPAEKAGQM  TQAERNALRA  PGDIAAYDLG  SLLSGGGSVP  TPNTAAAWAK420
MVDAYQLRAQ  ATRFQIPLIY  GVDAVHGHNN  VVGATIMPHN  IGIGAGRDPK  SAERTGAITA480
KEVRSTGVPW  DFAPCVCVTR  DERWGRSYEA  FGEDPALVEA  METVIQGMQG  APSGKDLHRN540
DKVLGSAKHF  VGDGGTEYGS  ATTGSYTIDQ  GITKVTRQEL  EAVHLSPFAE  SVKRGVGTIM600
PSYSSLDILG  DDQGPVKMHA  NAEMINGVLK  DRMGFEGFVI  SDWQAIDQIP  GDYPSDVRTS660
INAGLDMIMV  PTAYQEFTKT  LKDEVAAGRI  SEARIDDAVS  RILTQKFRLG  LFEKPYADTT720
HLDKVGSAEH  RAVAREAVAK  SQVLLKNEGA  VLPLEPDQKV  YVAGSNADDI  GNQAGGWTIS780
WQGSSGKTTP  GTTILEGMKK  AAKTPESVTY  SKDASAATDG  YDVGVVVVGE  TPYAEGIGDV840
GNGHDLVLTA  ADKAAVDKVC  AAMKCAVLIV  SGRPQLVGDQ  LGKINALVAS  WLPGSEGDGV900
ADVLYGKRAF  TGQLPVTWPK  SEAQVPINVG  DATYDPQFPY  GWGLTTLKKP  PAGGELTLAA960
LALAAQVAEK  AHLGKTPAGK  AIVDQARLLV  QQKINGKFTQ  AVSKPFAEAD  HLLLTGDLTG1020
AVAKLRTAYR  AA1032

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help