Information for CAZyme ID: QKW38271.1
Basic Information
| GenBank ID | QKW38271.1 |
| Family | CBM16, GH18 |
| Sequence Length | 588 |
| UniProt ID | A0A7H8M8G0(100,100) |
| Average pLDDT? | 91.74 |
| CAZy50 ID | 4712 |
| CAZy50 Rep | No, WBV74241.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2742128 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Streptosporangiales |
| Family | Thermomonosporaceae |
| Genus | Actinomadura |
| Species | Actinomadura sp. NAK00032 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRRIWVLAAL LAGLLVGVTA PAQAANVLAN AGFESGSLSP WACDGGSVVS SPVRTGSHAL | 60 |
| AGGVTAGSTG QCAQTVAVQP NTAYTLSAWV RGNYVYLGVT GGTSTWTPSA ADFTQLSVTF | 120 |
| TTGANQTSAQ IFLHGWYGNG AYYADDVVLD GPGGEPQPGV PGTPRKPQLG TVSDNSVALN | 180 |
| WGASSGTVAG YRVYEGGTVK ATVTGGTSAT VSGLAACSSH TYTVAAYNDV GESAKSEPVS | 240 |
| ARTTGCVNTG LPKHALIGYM HASFANGSGY VRMADVPDAW DIIDLAFGEP TSPTSGDIRF | 300 |
| TRCPVSECPN VESDEEFIAA IRAKQAQGKK VLISIGGQNG QVQLTTAAAR DAFVRSVSAI | 360 |
| IDRYGLDGLD VDFEGHSLYL NAGDTDFRNP TTPVIVNLIS ALKSLKAKYG AKFVLTMAPE | 420 |
| TFFVQVGHQF YGGSSGGDNR TGAYLPVIDA MRDDLTVLHV QDYNSGPVMG LDGQYHTMGG | 480 |
| AEFHIAMTDM VKAGFPVANT GHTFPGLRPD QIGIGLPAAV SAGNGYTPPA QVQQAVNCLV | 540 |
| KGSGCGGYTL RGGTSPDLRG LMTWSINWDR YYGWEFANSH EPFLNSLP | 588 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.74 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM16(26-134)+GH18(256-540)
| MRRIWVLAAL LAGLLVGVTA PAQAANVLAN AGFESGSLSP WACDGGSVVS SPVRTGSHAL | 60 |
| AGGVTAGSTG QCAQTVAVQP NTAYTLSAWV RGNYVYLGVT GGTSTWTPSA ADFTQLSVTF | 120 |
| TTGANQTSAQ IFLHGWYGNG AYYADDVVLD GPGGEPQPGV PGTPRKPQLG TVSDNSVALN | 180 |
| WGASSGTVAG YRVYEGGTVK ATVTGGTSAT VSGLAACSSH TYTVAAYNDV GESAKSEPVS | 240 |
| ARTTGCVNTG LPKHALIGYM HASFANGSGY VRMADVPDAW DIIDLAFGEP TSPTSGDIRF | 300 |
| TRCPVSECPN VESDEEFIAA IRAKQAQGKK VLISIGGQNG QVQLTTAAAR DAFVRSVSAI | 360 |
| IDRYGLDGLD VDFEGHSLYL NAGDTDFRNP TTPVIVNLIS ALKSLKAKYG AKFVLTMAPE | 420 |
| TFFVQVGHQF YGGSSGGDNR TGAYLPVIDA MRDDLTVLHV QDYNSGPVMG LDGQYHTMGG | 480 |
| AEFHIAMTDM VKAGFPVANT GHTFPGLRPD QIGIGLPAAV SAGNGYTPPA QVQQAVNCLV | 540 |
| KGSGCGGYTL RGGTSPDLRG LMTWSINWDR YYGWEFANSH EPFLNSLP | 588 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.