CAZyme3D

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Entry ID

Information for CAZyme ID: QKW18726.1

Basic Information

GenBank IDQKW18726.1
FamilyGH46
Sequence Length289
UniProt IDA0A7H8KQ05(100,100)Download
Average pLDDT?86.48
CAZy50 ID33092
CAZy50 RepNo, QNA77275.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2742135
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusKitasatospora
SpeciesKitasatospora sp. NA04385

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MHPTEHRTAR  TARTTRAALA  ILVGALPLTL  AAAGTGHAAA  PAASSTSAVA  VAAVGLDDPA60
KKEIAMELVS  SAENSSLDWK  AQYKYIEDIG  DGRGYTAGII  GFCSGTGDML  ELVQHYTDLK120
PGNVLAKYLP  ALKKVNGTES  HSGLGSAFVN  DWKTAAKDTV  FQQAQNDERD  RVYFNPSVQQ180
GKADGLRALG  QFIYYDAIVM  HGPGNSSDSF  GGIRAAAMKK  AKTPAQGGDE  TAYLNAFMDA240
RKVIMKQEEA  HADTSRVDTE  QKVFLNAKNF  DLNPPLKWKV  YGDSYQING289

Predicted 3D structure by AlphaFold2 with pLDDT = 86.48 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH46(55-273)

MHPTEHRTAR  TARTTRAALA  ILVGALPLTL  AAAGTGHAAA  PAASSTSAVA  VAAVGLDDPA60
KKEIAMELVS  SAENSSLDWK  AQYKYIEDIG  DGRGYTAGII  GFCSGTGDML  ELVQHYTDLK120
PGNVLAKYLP  ALKKVNGTES  HSGLGSAFVN  DWKTAAKDTV  FQQAQNDERD  RVYFNPSVQQ180
GKADGLRALG  QFIYYDAIVM  HGPGNSSDSF  GGIRAAAMKK  AKTPAQGGDE  TAYLNAFMDA240
RKVIMKQEEA  HADTSRVDTE  QKVFLNAKNF  DLNPPLKWKV  YGDSYQING289

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help