CAZyme3D

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Entry ID

Information for CAZyme ID: QKW02664.1

Basic Information

GenBank IDQKW02664.1
FamilyCBM2, GH18
Sequence Length607
UniProt IDA0A7H8JCU5(100,100)Download
Average pLDDT?90.09
CAZy50 ID28136
CAZy50 RepNo, DAA01336.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2742133
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. NA02536

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRFRHRAAAG  FATLLLPFAG  LVGLASPAQA  ATSATATYAK  TQDWGSGFEG  KWTVKNTGTT60
TINSWTVEWD  FPSGTKVTSA  WDATVTSSGD  HWTAKNVGWN  GTLAPGASVS  FGFNGSGTGS120
PSGCKLNGGG  CDGTSVPGDN  APSAPGTPTA  SGITDTSVKL  SWTAATDDKG  IKNYDVLRDG180
AKVATVTGTT  YTDSGLAKGT  DYSYAVQARD  TADQTGPASG  AVKVRTTGNT  EEPPPTGDKV240
KLGYFTEWGV  YGRNYHVKNL  VTSGSAAKIT  HINYAFGNVV  NGQCKLDDSY  AATDKAYTAD300
QSVSGTADTW  DQPLRGNFNQ  LRQLKAKYPH  IKVLYSFGGW  TYSGGFGQAA  QNPAAFAKSC360
KQVVEDPRWA  DVFDGIDIDW  EYPNACGLTC  DTSGPAAFKN  LSQALRAEFG  NDYLITAAIT420
ADGSAGGKID  AADYGGAAQY  LDWYNVMTYD  YFGAWDKAGP  TAPHSPLNSY  NGIPKEGFNS480
AAAISKLRAK  GVPASKLLLG  IGFYGRGWTG  VSQAAPGGTA  TGPATGTYEA  GIEDYKVLKN540
SCPATGTVAG  TAYAHCGNNW  WSYDTPATIN  TKMAWAKSQG  LGGAFFWEFS  GDTANGELVG600
AIDGGLK607

Predicted 3D structure by AlphaFold2 with pLDDT = 90.09 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM2(35-131)+GH18(241-597)

MRFRHRAAAG  FATLLLPFAG  LVGLASPAQA  ATSATATYAK  TQDWGSGFEG  KWTVKNTGTT60
TINSWTVEWD  FPSGTKVTSA  WDATVTSSGD  HWTAKNVGWN  GTLAPGASVS  FGFNGSGTGS120
PSGCKLNGGG  CDGTSVPGDN  APSAPGTPTA  SGITDTSVKL  SWTAATDDKG  IKNYDVLRDG180
AKVATVTGTT  YTDSGLAKGT  DYSYAVQARD  TADQTGPASG  AVKVRTTGNT  EEPPPTGDKV240
KLGYFTEWGV  YGRNYHVKNL  VTSGSAAKIT  HINYAFGNVV  NGQCKLDDSY  AATDKAYTAD300
QSVSGTADTW  DQPLRGNFNQ  LRQLKAKYPH  IKVLYSFGGW  TYSGGFGQAA  QNPAAFAKSC360
KQVVEDPRWA  DVFDGIDIDW  EYPNACGLTC  DTSGPAAFKN  LSQALRAEFG  NDYLITAAIT420
ADGSAGGKID  AADYGGAAQY  LDWYNVMTYD  YFGAWDKAGP  TAPHSPLNSY  NGIPKEGFNS480
AAAISKLRAK  GVPASKLLLG  IGFYGRGWTG  VSQAAPGGTA  TGPATGTYEA  GIEDYKVLKN540
SCPATGTVAG  TAYAHCGNNW  WSYDTPATIN  TKMAWAKSQG  LGGAFFWEFS  GDTANGELVG600
AIDGGLK607

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help