Information for CAZyme ID: QKJ69334.1
Basic Information
| GenBank ID | QKJ69334.1 |
| Family | GH2 |
| Sequence Length | 1006 |
| UniProt ID | A0A6M8SZ23(100,100) |
| Average pLDDT? | 95.41 |
| CAZy50 ID | 13070 |
| CAZy50 Rep | No, QIW15598.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 738 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Glaesserella |
| Species | Glaesserella parasuis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPLPNYHQDP TLLHINTTPR HAYFIPFATQ DKVYPLEREQ SSLFTLLNGE WQFNYFTSVM | 60 |
| DLPENFLSQP FEHRIPVPSN WQTQGFDQHQ YTNINYPFPF DPPYVPHDNP CGVYQRIFHY | 120 |
| EPKSTKRYLL NFEGVDACLY LYLNQQFVGY GQVSHCTNEF DVTDFLISGE NQLNVVVLKW | 180 |
| CDGSYLEDQD KFRMSGIFRD VYLLEREQNY LQDFFIKTSL SEALDQADLS VEYTFVQSPQ | 240 |
| QLTFQLFDPQ HRLIAEQTSD HFKVKIDKPQ LWNAEQPQLY TLRLSYGNEV IEQAVGFRRI | 300 |
| EVKDGILLLN NHPIKFRGVN RHDSDPLTGY VISREQAEQD FRLMKQHNIN AIRTAHYPNA | 360 |
| PWFSELCDRY GFYLISESDI ESHGASMQYV PTPEHSILLN VAKQDDNKRI QQQTIDNFCY | 420 |
| FARHPDYKQA ILDRTYANVE RDKNRPSVLI WSLGNEAGYG ENFEASAKWI KQRDPSRLVH | 480 |
| YESAIYQHSE HQNDLTPLDF HSEMYASTED MDRYFEQPQT KPFLLCEYSH AMGNSNGDLE | 540 |
| DYFQTFEKYA GACGGFIWEW CDHAPYLPDG SGHFGYGGDF GEYPHDSNFC MDGLVSPTRQ | 600 |
| PHSNLLELKN VNRPVRASLE QGKVYIKNYL DFTDLADHLT ISYRLSENGK TINEGEISVN | 660 |
| CPPKQTACLP IELPQDNGKL WLLELNYRQN HVTTFVEQGH ILGFDQIKLF NNAFQPDHLL | 720 |
| QTKTTSSPLV IEQTTQHIIV KNAKVEYRFD RSKGILSNII YQGKSIIAHP LDFNVWRAPT | 780 |
| DNDRLIRTFW ENAGYDKAYS RAYQMQVDRQ EESVIVTADC AIVATAKEPI VRLQVKYHLT | 840 |
| ADGNITLQVQ GKRNPHLPYL PRFGLRFFLE KDNSQLEYFG YGESESYIDK HHASRLGLYQ | 900 |
| TTAEQNHQDY VKPQENGSHY GCEYLHTQDL EITAPQPFSF NFSPYTQEEL TLKKHHYELE | 960 |
| KSPYHILCVD YKMSGIGSNS CGPNLKEGYR INDKEISWII QLYMNT | 1006 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.41 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(36-896)
| MPLPNYHQDP TLLHINTTPR HAYFIPFATQ DKVYPLEREQ SSLFTLLNGE WQFNYFTSVM | 60 |
| DLPENFLSQP FEHRIPVPSN WQTQGFDQHQ YTNINYPFPF DPPYVPHDNP CGVYQRIFHY | 120 |
| EPKSTKRYLL NFEGVDACLY LYLNQQFVGY GQVSHCTNEF DVTDFLISGE NQLNVVVLKW | 180 |
| CDGSYLEDQD KFRMSGIFRD VYLLEREQNY LQDFFIKTSL SEALDQADLS VEYTFVQSPQ | 240 |
| QLTFQLFDPQ HRLIAEQTSD HFKVKIDKPQ LWNAEQPQLY TLRLSYGNEV IEQAVGFRRI | 300 |
| EVKDGILLLN NHPIKFRGVN RHDSDPLTGY VISREQAEQD FRLMKQHNIN AIRTAHYPNA | 360 |
| PWFSELCDRY GFYLISESDI ESHGASMQYV PTPEHSILLN VAKQDDNKRI QQQTIDNFCY | 420 |
| FARHPDYKQA ILDRTYANVE RDKNRPSVLI WSLGNEAGYG ENFEASAKWI KQRDPSRLVH | 480 |
| YESAIYQHSE HQNDLTPLDF HSEMYASTED MDRYFEQPQT KPFLLCEYSH AMGNSNGDLE | 540 |
| DYFQTFEKYA GACGGFIWEW CDHAPYLPDG SGHFGYGGDF GEYPHDSNFC MDGLVSPTRQ | 600 |
| PHSNLLELKN VNRPVRASLE QGKVYIKNYL DFTDLADHLT ISYRLSENGK TINEGEISVN | 660 |
| CPPKQTACLP IELPQDNGKL WLLELNYRQN HVTTFVEQGH ILGFDQIKLF NNAFQPDHLL | 720 |
| QTKTTSSPLV IEQTTQHIIV KNAKVEYRFD RSKGILSNII YQGKSIIAHP LDFNVWRAPT | 780 |
| DNDRLIRTFW ENAGYDKAYS RAYQMQVDRQ EESVIVTADC AIVATAKEPI VRLQVKYHLT | 840 |
| ADGNITLQVQ GKRNPHLPYL PRFGLRFFLE KDNSQLEYFG YGESESYIDK HHASRLGLYQ | 900 |
| TTAEQNHQDY VKPQENGSHY GCEYLHTQDL EITAPQPFSF NFSPYTQEEL TLKKHHYELE | 960 |
| KSPYHILCVD YKMSGIGSNS CGPNLKEGYR INDKEISWII QLYMNT | 1006 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.