CAZyme3D

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Entry ID

Information for CAZyme ID: QKJ30185.1

Basic Information

GenBank IDQKJ30185.1
FamilyCE12
Sequence Length256
UniProt IDA0A7D4Q9K8(100,100)Download
Average pLDDT?91.62
CAZy50 ID164651
CAZy50 RepNo, CDT08348.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2740462
KingdomBacteria
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter mali

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKKIKYVFAL  LMMVVIGSAF  IQQKPTLYMV  GDSTMHNNDK  ELWGWGTTIA  WQLDTNRITV60
VNSAMAGRST  RSFTREGRWA  KVVASLKPGD  FVIMGFGHNE  GSKPDTAKKN  GDRGVLRGIS120
DDSVTLNWAN  KAPEVVHTYG  WYFRKFIREA  KAKGANPIVV  SMIPRREWDK  DGKIILADKD180
YGLWAKQVAE  QENVPFVDVN  TITANKYNQL  TREQVFALFG  TDHTHTNKAG  AEINAQSFVE240
GLKLQPSIAL  NNYVKK256

Predicted 3D structure by AlphaFold2 with pLDDT = 91.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE12(26-242)

MKKIKYVFAL  LMMVVIGSAF  IQQKPTLYMV  GDSTMHNNDK  ELWGWGTTIA  WQLDTNRITV60
VNSAMAGRST  RSFTREGRWA  KVVASLKPGD  FVIMGFGHNE  GSKPDTAKKN  GDRGVLRGIS120
DDSVTLNWAN  KAPEVVHTYG  WYFRKFIREA  KAKGANPIVV  SMIPRREWDK  DGKIILADKD180
YGLWAKQVAE  QENVPFVDVN  TITANKYNQL  TREQVFALFG  TDHTHTNKAG  AEINAQSFVE240
GLKLQPSIAL  NNYVKK256

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help