CAZyme3D

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Entry ID

Information for CAZyme ID: QKH01398.1

Basic Information

GenBank IDQKH01398.1
FamilyCBM50, GH18
Sequence Length430
UniProt IDA0A7D4C1S0(100,100)Download
Average pLDDT?97.87
CAZy50 ID81424
CAZy50 RepNo, QTM16383.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1396
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus cereus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIQIVTVRSG  DSVYSLASKY  GSTPDEIVKD  NGLNPSETLV  VGQALIVNTK  GNNYYVQPGD60
SLYRISQTYN  VPLASLAKVN  NLSLKSILHV  GQQLYIPKGT  KRAVESIAYL  QPSTIPIKES120
LVNATRAINP  FLTYLAYFSF  EAKRDGTLKE  PTETAKIANI  ATQGNTIPML  VITNIENGNF180
SADLTSVILR  DATIQNKFIT  NILQTAEKYG  MRDIHFDFES  VAPEDREAYN  RFLRNVKTRL240
PSGYTLSTTL  VPKTSSNQKG  KFFEAHDYKA  QGQIVDFVVI  MTYDWGWQGG  PPMAISPIGP300
VKEVLQYAKS  QMPPQKIMMG  QNLYGFDWKL  PFKQGNPPAK  AVSSVAAVAL  ARKYNVPIRY360
DFTAQAPHFN  YFDENGVQHE  VWFEDARSIQ  SKFNLMKEQG  IGGISYWKIG  LPFPQNWRLL420
VENFTITKKG  430

Predicted 3D structure by AlphaFold2 with pLDDT = 97.87 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM50(6-47)+CBM50(54-97)+GH18(145-410)

MIQIVTVRSG  DSVYSLASKY  GSTPDEIVKD  NGLNPSETLV  VGQALIVNTK  GNNYYVQPGD60
SLYRISQTYN  VPLASLAKVN  NLSLKSILHV  GQQLYIPKGT  KRAVESIAYL  QPSTIPIKES120
LVNATRAINP  FLTYLAYFSF  EAKRDGTLKE  PTETAKIANI  ATQGNTIPML  VITNIENGNF180
SADLTSVILR  DATIQNKFIT  NILQTAEKYG  MRDIHFDFES  VAPEDREAYN  RFLRNVKTRL240
PSGYTLSTTL  VPKTSSNQKG  KFFEAHDYKA  QGQIVDFVVI  MTYDWGWQGG  PPMAISPIGP300
VKEVLQYAKS  QMPPQKIMMG  QNLYGFDWKL  PFKQGNPPAK  AVSSVAAVAL  ARKYNVPIRY360
DFTAQAPHFN  YFDENGVQHE  VWFEDARSIQ  SKFNLMKEQG  IGGISYWKIG  LPFPQNWRLL420
VENFTITKKG  430

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help