Information for CAZyme ID: QKD84887.1
Basic Information
GenBank ID | QKD84887.1 |
Family | GT51 |
Sequence Length | 760 |
UniProt ID | A0A6M8BIW4(100,100)![]() |
Average pLDDT? | 83.03 |
CAZy50 ID | 15868 |
CAZy50 Rep | No, BAG03731.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2737172 |
Kingdom | Bacteria |
Phylum | Cyanobacteriota |
Class | Cyanophyceae |
Order | Oculatellales |
Family | Oculatellaceae |
Genus | Thermoleptolyngbya |
Species | Thermoleptolyngbya sichuanensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MAALAGAGGF GMAAIDTVRQ IQSELPDPED ALTYTRDGSM TIKAADGTVL QQLGPATREA | 60 |
LSLDQIPDTM INAFIAAEDK KFYEHSGVDY RAIARAALAN LSAGEVVEGA STITQQVTRI | 120 |
VFLGQERTLD RKLREALMAH KMENELTKDQ ILERYLNLVY LGSGAYGVGD AAWIYFSKPI | 180 |
GELSLSETAM IAGLAPAPSE YSPLVNPDLA RSRRDIVLER MYESGFITAA ELAEAKAAEI | 240 |
ELAPSQPRNL ISQTPHFTSY ILQQELPQRV SPEVLEVGGL TIETTLNPRW QAIAQETVAK | 300 |
AVERYGRWER FSEAALVSID PRTGEIKALV GGKDLIAGQF NRATQAQRQP GSTFKAFVYT | 360 |
AAIAAGFSPY KNYLDSKLVV DGYEVKNYSE RHAGDVSMRD ALARSINVVA VKVMLDVGFN | 420 |
PVIETAKRMG IQSKLIPAYS LALGTLEVNL LELTSAYGTL AAQGKHIEPH GITRIIDRFG | 480 |
NVIYEANFTP EQAVDTDSAN IMTWMLRGVV NGGTGGNAAL QGRPVAGKTG TTDAKRDLWF | 540 |
IGYIPQLVTG VWLGNDNNRP TAGASSTAAL VWRNYMAQAT EGMPVESFPQ PNLRGDRKGS | 600 |
IKAERIRPRR MFVGPTTGGD AEGESSGSGS RSRRRSEEAA PARSPSSPAA REASPDTRSE | 660 |
PRKIRNSDPV QAAPSSPEEP PARPQPPAPP VEPEPRPAEP RPEPVRVERP QPEPVEARPA | 720 |
PPPPPPPPER PAPPPRLERP RSEPAAPAPA PAEAPPPATE | 760 |
Predicted 3D structure by AlphaFold2 with pLDDT = 83.03 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(46-222)
MAALAGAGGF GMAAIDTVRQ IQSELPDPED ALTYTRDGSM TIKAADGTVL QQLGPATREA | 60 |
LSLDQIPDTM INAFIAAEDK KFYEHSGVDY RAIARAALAN LSAGEVVEGA STITQQVTRI | 120 |
VFLGQERTLD RKLREALMAH KMENELTKDQ ILERYLNLVY LGSGAYGVGD AAWIYFSKPI | 180 |
GELSLSETAM IAGLAPAPSE YSPLVNPDLA RSRRDIVLER MYESGFITAA ELAEAKAAEI | 240 |
ELAPSQPRNL ISQTPHFTSY ILQQELPQRV SPEVLEVGGL TIETTLNPRW QAIAQETVAK | 300 |
AVERYGRWER FSEAALVSID PRTGEIKALV GGKDLIAGQF NRATQAQRQP GSTFKAFVYT | 360 |
AAIAAGFSPY KNYLDSKLVV DGYEVKNYSE RHAGDVSMRD ALARSINVVA VKVMLDVGFN | 420 |
PVIETAKRMG IQSKLIPAYS LALGTLEVNL LELTSAYGTL AAQGKHIEPH GITRIIDRFG | 480 |
NVIYEANFTP EQAVDTDSAN IMTWMLRGVV NGGTGGNAAL QGRPVAGKTG TTDAKRDLWF | 540 |
IGYIPQLVTG VWLGNDNNRP TAGASSTAAL VWRNYMAQAT EGMPVESFPQ PNLRGDRKGS | 600 |
IKAERIRPRR MFVGPTTGGD AEGESSGSGS RSRRRSEEAA PARSPSSPAA REASPDTRSE | 660 |
PRKIRNSDPV QAAPSSPEEP PARPQPPAPP VEPEPRPAEP RPEPVRVERP QPEPVEARPA | 720 |
PPPPPPPPER PAPPPRLERP RSEPAAPAPA PAEAPPPATE | 760 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.