CAZyme3D

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Entry ID

Information for CAZyme ID: QKD84887.1

Basic Information

GenBank IDQKD84887.1
FamilyGT51
Sequence Length760
UniProt IDA0A6M8BIW4(100,100)Download
Average pLDDT?83.03
CAZy50 ID15868
CAZy50 RepNo, BAG03731.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2737172
KingdomBacteria
PhylumCyanobacteriota
ClassCyanophyceae
OrderOculatellales
FamilyOculatellaceae
GenusThermoleptolyngbya
SpeciesThermoleptolyngbya sichuanensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAALAGAGGF  GMAAIDTVRQ  IQSELPDPED  ALTYTRDGSM  TIKAADGTVL  QQLGPATREA60
LSLDQIPDTM  INAFIAAEDK  KFYEHSGVDY  RAIARAALAN  LSAGEVVEGA  STITQQVTRI120
VFLGQERTLD  RKLREALMAH  KMENELTKDQ  ILERYLNLVY  LGSGAYGVGD  AAWIYFSKPI180
GELSLSETAM  IAGLAPAPSE  YSPLVNPDLA  RSRRDIVLER  MYESGFITAA  ELAEAKAAEI240
ELAPSQPRNL  ISQTPHFTSY  ILQQELPQRV  SPEVLEVGGL  TIETTLNPRW  QAIAQETVAK300
AVERYGRWER  FSEAALVSID  PRTGEIKALV  GGKDLIAGQF  NRATQAQRQP  GSTFKAFVYT360
AAIAAGFSPY  KNYLDSKLVV  DGYEVKNYSE  RHAGDVSMRD  ALARSINVVA  VKVMLDVGFN420
PVIETAKRMG  IQSKLIPAYS  LALGTLEVNL  LELTSAYGTL  AAQGKHIEPH  GITRIIDRFG480
NVIYEANFTP  EQAVDTDSAN  IMTWMLRGVV  NGGTGGNAAL  QGRPVAGKTG  TTDAKRDLWF540
IGYIPQLVTG  VWLGNDNNRP  TAGASSTAAL  VWRNYMAQAT  EGMPVESFPQ  PNLRGDRKGS600
IKAERIRPRR  MFVGPTTGGD  AEGESSGSGS  RSRRRSEEAA  PARSPSSPAA  REASPDTRSE660
PRKIRNSDPV  QAAPSSPEEP  PARPQPPAPP  VEPEPRPAEP  RPEPVRVERP  QPEPVEARPA720
PPPPPPPPER  PAPPPRLERP  RSEPAAPAPA  PAEAPPPATE  760

Predicted 3D structure by AlphaFold2 with pLDDT = 83.03 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(46-222)

MAALAGAGGF  GMAAIDTVRQ  IQSELPDPED  ALTYTRDGSM  TIKAADGTVL  QQLGPATREA60
LSLDQIPDTM  INAFIAAEDK  KFYEHSGVDY  RAIARAALAN  LSAGEVVEGA  STITQQVTRI120
VFLGQERTLD  RKLREALMAH  KMENELTKDQ  ILERYLNLVY  LGSGAYGVGD  AAWIYFSKPI180
GELSLSETAM  IAGLAPAPSE  YSPLVNPDLA  RSRRDIVLER  MYESGFITAA  ELAEAKAAEI240
ELAPSQPRNL  ISQTPHFTSY  ILQQELPQRV  SPEVLEVGGL  TIETTLNPRW  QAIAQETVAK300
AVERYGRWER  FSEAALVSID  PRTGEIKALV  GGKDLIAGQF  NRATQAQRQP  GSTFKAFVYT360
AAIAAGFSPY  KNYLDSKLVV  DGYEVKNYSE  RHAGDVSMRD  ALARSINVVA  VKVMLDVGFN420
PVIETAKRMG  IQSKLIPAYS  LALGTLEVNL  LELTSAYGTL  AAQGKHIEPH  GITRIIDRFG480
NVIYEANFTP  EQAVDTDSAN  IMTWMLRGVV  NGGTGGNAAL  QGRPVAGKTG  TTDAKRDLWF540
IGYIPQLVTG  VWLGNDNNRP  TAGASSTAAL  VWRNYMAQAT  EGMPVESFPQ  PNLRGDRKGS600
IKAERIRPRR  MFVGPTTGGD  AEGESSGSGS  RSRRRSEEAA  PARSPSSPAA  REASPDTRSE660
PRKIRNSDPV  QAAPSSPEEP  PARPQPPAPP  VEPEPRPAEP  RPEPVRVERP  QPEPVEARPA720
PPPPPPPPER  PAPPPRLERP  RSEPAAPAPA  PAEAPPPATE  760

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help