CAZyme3D

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Entry ID

Information for CAZyme ID: QKD56109.1

Basic Information

GenBank IDQKD56109.1
FamilyAA3_2
Sequence Length581
UniProt IDW9K6D5(100,100)Download
Average pLDDT?95.88
CAZy50 ID11365
CAZy50 RepNo, QBZ61175.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID660027
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium oxysporum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAAAPDSTYD  FIICGGGTSG  CVVAARLAED  PNVKVLVLEA  GPHNEHLENV  HMVGGWSNNF60
DKETDWNVVS  IPGPGVNNRS  VKLSRGKFLG  GSSGCNGTLM  VKGMKQDYDD  WNLPGWSGDD120
MFKYMLKAEN  FHTKDWFKET  KGAHGYEGHV  HTEPHDLAPI  SNLIGESMVS  KGLPLDHDMF180
SAGSNPHGCG  HSVRTVHQGL  RTTSADFITK  QKPRDNLHLM  VETHVDKVII  EKDGQGELKA240
TGVRGVKADG  SVVELKASKE  VIISSGAYCS  PNVLNRSGIG  AKVELEQHGI  TTLVDLPGVG300
KNLQDHLIVF  MFYETDKEGL  TTDSLVYHGN  ALEKAYTQWK  EEKKGPLTVF  PFGIFAYARM360
DERLADSKIW  NAAPRKEGRD  PMGLTPKQPQ  IEFFTTECYG  GPKQYDQFPI  DNKHAFSMIA420
ELFAPKSRGT  VTLRDASATS  VPVVDCNYLS  DPLDLEVLAE  ACAFGNEIIT  EGSGTKDIVK480
GSWPSDLVHH  KYKTREDWKE  YVKDNATTCY  HASGSCAAGK  KDNPMAVVDE  KLQVYGVKGL540
RVADCSIMPT  VNNGHTQMPA  YGIGEKAADL  IKERWALSAK  L581

Predicted 3D structure by AlphaFold2 with pLDDT = 95.88 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA3_2(8-573)

MAAAPDSTYD  FIICGGGTSG  CVVAARLAED  PNVKVLVLEA  GPHNEHLENV  HMVGGWSNNF60
DKETDWNVVS  IPGPGVNNRS  VKLSRGKFLG  GSSGCNGTLM  VKGMKQDYDD  WNLPGWSGDD120
MFKYMLKAEN  FHTKDWFKET  KGAHGYEGHV  HTEPHDLAPI  SNLIGESMVS  KGLPLDHDMF180
SAGSNPHGCG  HSVRTVHQGL  RTTSADFITK  QKPRDNLHLM  VETHVDKVII  EKDGQGELKA240
TGVRGVKADG  SVVELKASKE  VIISSGAYCS  PNVLNRSGIG  AKVELEQHGI  TTLVDLPGVG300
KNLQDHLIVF  MFYETDKEGL  TTDSLVYHGN  ALEKAYTQWK  EEKKGPLTVF  PFGIFAYARM360
DERLADSKIW  NAAPRKEGRD  PMGLTPKQPQ  IEFFTTECYG  GPKQYDQFPI  DNKHAFSMIA420
ELFAPKSRGT  VTLRDASATS  VPVVDCNYLS  DPLDLEVLAE  ACAFGNEIIT  EGSGTKDIVK480
GSWPSDLVHH  KYKTREDWKE  YVKDNATTCY  HASGSCAAGK  KDNPMAVVDE  KLQVYGVKGL540
RVADCSIMPT  VNNGHTQMPA  YGIGEKAADL  IKERWALSAK  L581

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help