CAZyme3D

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Entry ID

Information for CAZyme ID: QJU06148.1

Basic Information

GenBank IDQJU06148.1
FamilyGT51
Sequence Length799
UniProt IDA0A6M5F3S7(100,100)Download
Average pLDDT?85.85
CAZy50 ID21967
CAZy50 RepNo, AKM80390.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2572087
KingdomBacteria
PhylumCandidatus Saccharibacteria
Class
Order
Family
Genus
SpeciesCandidatus Saccharibacteria bacterium oral taxon 955

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVKKNTQPAR  MDRYANIARI  SRSTPRSRPM  KTGKFAWFRN  LSRKKKIAII  ATPILAFLIL60
TPLITYFMLV  NDIRDPERLM  NRNNTGIALT  DVNDKPYYSI  GRAEHRKRVP  LDQISDYAKK120
ALIAGEDKDF  YKHGGFNLIS  IARALVTRTG  GGSTLTQQLV  KNTLLTDEQS  YLRKYQELFM180
AIAVEQNYSK  DDILGMYLNS  VYFGENAFGI  EDAARAYFNK  APKDLTLAES  AMLIGVLPAP240
SAYSPISGNM  EYAKKRQNTV  LTRMVNNGYI  TEAEKTAAYN  EALKYGTGAS  KENKTAPHFV300
EMVINELSKK  YGYEKVMRSG  YRVKTTLDLD  IQSKLEDSVI  KGMKHINAMG  GSNASGIVLD360
PKTGDVKALV  GSADYNNEQW  GKVNMATTAR  QPGSSFKPIY  YSYALADGVI  TPATRLDDKV420
KDFGGGYIPR  DADRREASRG  GQVTVRQSLS  WSLNIPSLHL  IQKYGIKKTV  TAANNLGIGL480
DSSKDYDLTL  ALGSSEVPLH  KMVNAYAAFA  NEGRQYDVGL  VKQIKDKFDK  NIFTATHNSR540
QAISKEGAYL  ISNILSDNAT  RSRVFGSSLN  VSGRTVAVKT  GTTNDSRDAW  TIGYNPEYVI600
GVWVGNNDNT  AMKSGGSDMA  GPIWRNTMTK  LLQGRKNVQF  SMPSSIVQKA  VCTANGGLAS660
KSGPNTYNEF  FMTGAFPTNS  CEAEPTMISV  CDIEKGEVIL  IDEAKFDSTT  QSKDTANCKP720
PTQQVCELST  GKIITINKPD  FNSTKHSTDI  ENCQPPSTGS  QVQACDTTTG  QIVMVAASQI780
DGVRYTKNIT  NCEKSATNP799

Predicted 3D structure by AlphaFold2 with pLDDT = 85.85 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(102-265)

MVKKNTQPAR  MDRYANIARI  SRSTPRSRPM  KTGKFAWFRN  LSRKKKIAII  ATPILAFLIL60
TPLITYFMLV  NDIRDPERLM  NRNNTGIALT  DVNDKPYYSI  GRAEHRKRVP  LDQISDYAKK120
ALIAGEDKDF  YKHGGFNLIS  IARALVTRTG  GGSTLTQQLV  KNTLLTDEQS  YLRKYQELFM180
AIAVEQNYSK  DDILGMYLNS  VYFGENAFGI  EDAARAYFNK  APKDLTLAES  AMLIGVLPAP240
SAYSPISGNM  EYAKKRQNTV  LTRMVNNGYI  TEAEKTAAYN  EALKYGTGAS  KENKTAPHFV300
EMVINELSKK  YGYEKVMRSG  YRVKTTLDLD  IQSKLEDSVI  KGMKHINAMG  GSNASGIVLD360
PKTGDVKALV  GSADYNNEQW  GKVNMATTAR  QPGSSFKPIY  YSYALADGVI  TPATRLDDKV420
KDFGGGYIPR  DADRREASRG  GQVTVRQSLS  WSLNIPSLHL  IQKYGIKKTV  TAANNLGIGL480
DSSKDYDLTL  ALGSSEVPLH  KMVNAYAAFA  NEGRQYDVGL  VKQIKDKFDK  NIFTATHNSR540
QAISKEGAYL  ISNILSDNAT  RSRVFGSSLN  VSGRTVAVKT  GTTNDSRDAW  TIGYNPEYVI600
GVWVGNNDNT  AMKSGGSDMA  GPIWRNTMTK  LLQGRKNVQF  SMPSSIVQKA  VCTANGGLAS660
KSGPNTYNEF  FMTGAFPTNS  CEAEPTMISV  CDIEKGEVIL  IDEAKFDSTT  QSKDTANCKP720
PTQQVCELST  GKIITINKPD  FNSTKHSTDI  ENCQPPSTGS  QVQACDTTTG  QIVMVAASQI780
DGVRYTKNIT  NCEKSATNP799

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help