CAZyme3D

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Entry ID

Information for CAZyme ID: QJS99452.1

Basic Information

GenBank IDQJS99452.1
FamilyGH46
Sequence Length278
UniProt IDA0A6M4WT08(100,100)Download
Average pLDDT?88.53
CAZy50 ID33092
CAZy50 RepNo, QNA77275.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID249586
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces asoensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVHISRPVDG  PAPTSRRLFL  ALSGALAVAP  LLAAQQATAA  PTAKSLDDPA  KKEIAMKLVS60
SAENSSLDWK  AQYRYIEDIG  DGRGYTAGII  GFCSGTHDML  DLVQLYSDRK  PGNVLAKYLP120
ALREVDGTDS  HSGLDPNYPK  DWRKAAQDTA  FQQAQNDERD  RVYFNPAVRQ  GKTDGLRVLG180
QFAYYDAIVM  HGDGTDPTSF  RNIRKRALTK  AKPPAQGGDE  TTYLNAFLDA  RVWAMKQEEA240
HSDTSRVDTA  QRVFLRNGNL  DLDPPLDWKV  YGDSYHIG278

Predicted 3D structure by AlphaFold2 with pLDDT = 88.53 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH46(48-262)

MVHISRPVDG  PAPTSRRLFL  ALSGALAVAP  LLAAQQATAA  PTAKSLDDPA  KKEIAMKLVS60
SAENSSLDWK  AQYRYIEDIG  DGRGYTAGII  GFCSGTHDML  DLVQLYSDRK  PGNVLAKYLP120
ALREVDGTDS  HSGLDPNYPK  DWRKAAQDTA  FQQAQNDERD  RVYFNPAVRQ  GKTDGLRVLG180
QFAYYDAIVM  HGDGTDPTSF  RNIRKRALTK  AKPPAQGGDE  TTYLNAFLDA  RVWAMKQEEA240
HSDTSRVDTA  QRVFLRNGNL  DLDPPLDWKV  YGDSYHIG278

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help