CAZyme3D

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Entry ID

Information for CAZyme ID: QJS11532.1

Basic Information

GenBank IDQJS11532.1
FamilyCBM50
Sequence Length367
UniProt IDA0A6M4PKZ9(100,100)Download
Average pLDDT?59.57
CAZy50 ID94658
CAZy50 RepNo, ASN26079.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2726118
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces argyrophyllae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLSGNGRHRR  PRQAPALLVA  AGVTGSAIAI  PLLGAASANA  ADGTTWDKVA  ECESGGSWSA60
DTGNGYYGGL  QISQDDWNAY  GGGQYAASPD  QASRNQQIAV  AEKILADKGT  TPWATCALLS120
GLTEDAGSTH  VDTGVGGSGG  SGKAGGSGKT  SGSAGNSGTS  GSSGSSDSSD  SSDSSGLPDS180
SPSADADSGA  NSGSGAGSSS  EETATTPSVK  PDKGADAATG  SPGTNTPKSD  KSTAPDTGSP240
QGTGSTPTVT  PDAGVANDPQ  QAAGSWSLVD  TGSLGGGRHR  GASADESGAD  ESVTNGQNAA300
SAGRHASRGA  DTYTVRQGDT  LASIADSLDV  DGGWHALYDG  NKKAIGSDPN  HISAGQTLEV360
GGESGGK367

Predicted 3D structure by AlphaFold2 with pLDDT = 59.57 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM50(313-359)

MLSGNGRHRR  PRQAPALLVA  AGVTGSAIAI  PLLGAASANA  ADGTTWDKVA  ECESGGSWSA60
DTGNGYYGGL  QISQDDWNAY  GGGQYAASPD  QASRNQQIAV  AEKILADKGT  TPWATCALLS120
GLTEDAGSTH  VDTGVGGSGG  SGKAGGSGKT  SGSAGNSGTS  GSSGSSDSSD  SSDSSGLPDS180
SPSADADSGA  NSGSGAGSSS  EETATTPSVK  PDKGADAATG  SPGTNTPKSD  KSTAPDTGSP240
QGTGSTPTVT  PDAGVANDPQ  QAAGSWSLVD  TGSLGGGRHR  GASADESGAD  ESVTNGQNAA300
SAGRHASRGA  DTYTVRQGDT  LASIADSLDV  DGGWHALYDG  NKKAIGSDPN  HISAGQTLEV360
GGESGGK367

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help