Information for CAZyme ID: QJR53714.1
Basic Information
| GenBank ID | QJR53714.1 |
| Family | GH92 |
| Sequence Length | 740 |
| UniProt ID | A0A076IY13(100,100) |
| Average pLDDT? | 94.93 |
| CAZy50 ID | 31603 |
| CAZy50 Rep | No, AUP80078.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 357276 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKTPVLALFI SLVAFGACVS NKQTQPSTDY TQLVNPFIGT DFTGNTYPGA QAPFGMVQLS | 60 |
| PDNGLPGWDR ISGYFYPDST IAGFSHTHLS GTGAGDLYDI SFMPVTLPYQ EAEAPLGIYS | 120 |
| KFSHADEEAS AGYYRVLLKD YDINVELTAT ERCGIQRYTF PEGESAVFLN LKKAMNWDFT | 180 |
| NDSYIEIIDS CTIQGYRFSE GWARDQHVYF RTRFSKPFAS VEMDTTAITL KGKRVGTAYI | 240 |
| ARFNFDTEKG EQIVLSTALS GVSMEGAAKN MAAEAPHNDF DKYLAETKDN WNRQLGKIEI | 300 |
| TGDNKDDKVN FYTALYHTMI APTIYSDVDG SYYGPDKKIH QTDGWVNYGT FSLWDTYRAA | 360 |
| HPLFTYTEPQ RVNDMVKSFI AFYEQNGRLP VWNFWGSETD MMIGYHAVPV IVDAYLKGIG | 420 |
| DFDAEKALEA CVTTANLDNY RGIGLYKKLG YIPYNIKDEY NAENWSLSKT LEYAFDDYCI | 480 |
| AEMARKMGRT QLADEFYKRS QNYRNVFNPA SSFMQPIDDK GIFQPNFSPD DYTAHICESN | 540 |
| GWQYFWSVQQ DIKGLIALTG GKDRFTEKLD SMFTYIPASN ADLPLFSTGM IGQYAHGNEP | 600 |
| SHHVIYLYNK VRQPWKTQKY AAQVMHDLYF NAPAGLCGNE DCGQMSAWYV FSAMGFYPVN | 660 |
| PVSGEYEIGT PLFSEIQMHL DNGKTFTVLA PGVSRENIYI QSVKVNGQPY DKSYITHRQI | 720 |
| MDGATVEFEM GPEPGNIWYR | 740 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.93 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH92(241-734)
| MKTPVLALFI SLVAFGACVS NKQTQPSTDY TQLVNPFIGT DFTGNTYPGA QAPFGMVQLS | 60 |
| PDNGLPGWDR ISGYFYPDST IAGFSHTHLS GTGAGDLYDI SFMPVTLPYQ EAEAPLGIYS | 120 |
| KFSHADEEAS AGYYRVLLKD YDINVELTAT ERCGIQRYTF PEGESAVFLN LKKAMNWDFT | 180 |
| NDSYIEIIDS CTIQGYRFSE GWARDQHVYF RTRFSKPFAS VEMDTTAITL KGKRVGTAYI | 240 |
| ARFNFDTEKG EQIVLSTALS GVSMEGAAKN MAAEAPHNDF DKYLAETKDN WNRQLGKIEI | 300 |
| TGDNKDDKVN FYTALYHTMI APTIYSDVDG SYYGPDKKIH QTDGWVNYGT FSLWDTYRAA | 360 |
| HPLFTYTEPQ RVNDMVKSFI AFYEQNGRLP VWNFWGSETD MMIGYHAVPV IVDAYLKGIG | 420 |
| DFDAEKALEA CVTTANLDNY RGIGLYKKLG YIPYNIKDEY NAENWSLSKT LEYAFDDYCI | 480 |
| AEMARKMGRT QLADEFYKRS QNYRNVFNPA SSFMQPIDDK GIFQPNFSPD DYTAHICESN | 540 |
| GWQYFWSVQQ DIKGLIALTG GKDRFTEKLD SMFTYIPASN ADLPLFSTGM IGQYAHGNEP | 600 |
| SHHVIYLYNK VRQPWKTQKY AAQVMHDLYF NAPAGLCGNE DCGQMSAWYV FSAMGFYPVN | 660 |
| PVSGEYEIGT PLFSEIQMHL DNGKTFTVLA PGVSRENIYI QSVKVNGQPY DKSYITHRQI | 720 |
| MDGATVEFEM GPEPGNIWYR | 740 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.