Information for CAZyme ID: QJB38365.1
Basic Information
| GenBank ID | QJB38365.1 |
| Family | CBM6, GH16_3 |
| Sequence Length | 1169 |
| UniProt ID | A0A6H2BFL5(100,100) |
| Average pLDDT? | 85.19 |
| CAZy50 ID | 5377 |
| CAZy50 Rep | No, QEH41689.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2725414 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKTSTPTSDA RKGTALRRIA RLLQMHYNRL KIIPVLLLPL CLLCSTLHAQ YLLLDDMEGH | 60 |
| GPCSGRWTYY AGNTTTGKVE FGVPNPNPSG LNTSPLVAKF TKDTSSFEYM SASCQLTDSF | 120 |
| DLATNSTFKM LVYASTLDEI MFKLQPGNNY SKAVFFTFKP SRINHWEEAT YNFQSVKNRT | 180 |
| DFNTIAIQYI DGKKANGILY FDLVQGPNPT AIVLKDTTIL MGHENGAVLT AQVKGGTLKP | 240 |
| ALAAANWTAA NFPPGVTISG VQRLNDTTAR ITLSGNSPAN YSRTALKLSV AGAELTTANV | 300 |
| ASYTAKGNVV FEGNPNWTLV FADEFNTDGK PDRSKWIVDP RPKGWINGEQ QVYTDTTHDN | 360 |
| ARVRNGRLVI TGKKDFPTGN TTEPWSSGRL ITQGKFDFLY GKVEVRAKLP RARGSWPAIW | 420 |
| LMPTSSAYGG WPKSGELDIM EHVGNNFGTV LSTIHSQNHN WTNGGGISGS KKLMDADTVY | 480 |
| HVYAMEWAPD TLRFTFDTMQ VLTFANPHTD WKDWPFDQKF HLILNLAIGG GMGGSIVEAD | 540 |
| WPDSMQVDYA RVYQKGLGTP VLDTIIVTPS DLSFLPGKQQ QYTVKALDQN GYPITITPQW | 600 |
| GITGTGNSIT PAGLATLNNS GQVTVTATVD TTTKTGVAFV TRRPANYKPV PVKIQAESFD | 660 |
| NSNNTHTEPC SDIGGGLDVS FIGTGNWFEY DLDVPRADTY RIQFRVAVNS TSSLRIQLDT | 720 |
| TTLQTVNLPA SGGWQKWVTV TSAPVRLEQG QQTIKIVANK DGWNFNWLSI IRADSIPLAR | 780 |
| VVIKPDSATV NVGQAQQFTA TGYGQDSSLI AITPVWSVSG TGANITTGGL FTGTVDGDYQ | 840 |
| VLATAGAVGD TAIVHVVTPP VLTRIVLTPD SATVPLSASQ QFVAKGYDQR DNPFTFKPVW | 900 |
| STTGSGNTID TNGVFTAGIT PGSYTVTAAS GSLSVSNTVM VGYTCTVNDK YEAESASNRA | 960 |
| PGPVLEACTD TGGGQNFTGL KAGDWFAYNT LNVPVAGRYT ISFRVLSTAA SKIWIGHSTY | 1020 |
| KFDTISVPST GGVWKTITDT IRLPALNYTG VHILTGSPKF NWFSIDNCAV NEQAAATAYA | 1080 |
| KAEYPAKETD TKGPVLYPNP TNGQLTLDLR GQSYRRLTVL DIRGNLLRQW YIQKGERRIS | 1140 |
| RDISALPAGT YMLILEGDKN NKTFRIIKI | 1169 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.19 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH16_3(322-553)+CBM6(655-770)+CBM6(942-1066)
| MKTSTPTSDA RKGTALRRIA RLLQMHYNRL KIIPVLLLPL CLLCSTLHAQ YLLLDDMEGH | 60 |
| GPCSGRWTYY AGNTTTGKVE FGVPNPNPSG LNTSPLVAKF TKDTSSFEYM SASCQLTDSF | 120 |
| DLATNSTFKM LVYASTLDEI MFKLQPGNNY SKAVFFTFKP SRINHWEEAT YNFQSVKNRT | 180 |
| DFNTIAIQYI DGKKANGILY FDLVQGPNPT AIVLKDTTIL MGHENGAVLT AQVKGGTLKP | 240 |
| ALAAANWTAA NFPPGVTISG VQRLNDTTAR ITLSGNSPAN YSRTALKLSV AGAELTTANV | 300 |
| ASYTAKGNVV FEGNPNWTLV FADEFNTDGK PDRSKWIVDP RPKGWINGEQ QVYTDTTHDN | 360 |
| ARVRNGRLVI TGKKDFPTGN TTEPWSSGRL ITQGKFDFLY GKVEVRAKLP RARGSWPAIW | 420 |
| LMPTSSAYGG WPKSGELDIM EHVGNNFGTV LSTIHSQNHN WTNGGGISGS KKLMDADTVY | 480 |
| HVYAMEWAPD TLRFTFDTMQ VLTFANPHTD WKDWPFDQKF HLILNLAIGG GMGGSIVEAD | 540 |
| WPDSMQVDYA RVYQKGLGTP VLDTIIVTPS DLSFLPGKQQ QYTVKALDQN GYPITITPQW | 600 |
| GITGTGNSIT PAGLATLNNS GQVTVTATVD TTTKTGVAFV TRRPANYKPV PVKIQAESFD | 660 |
| NSNNTHTEPC SDIGGGLDVS FIGTGNWFEY DLDVPRADTY RIQFRVAVNS TSSLRIQLDT | 720 |
| TTLQTVNLPA SGGWQKWVTV TSAPVRLEQG QQTIKIVANK DGWNFNWLSI IRADSIPLAR | 780 |
| VVIKPDSATV NVGQAQQFTA TGYGQDSSLI AITPVWSVSG TGANITTGGL FTGTVDGDYQ | 840 |
| VLATAGAVGD TAIVHVVTPP VLTRIVLTPD SATVPLSASQ QFVAKGYDQR DNPFTFKPVW | 900 |
| STTGSGNTID TNGVFTAGIT PGSYTVTAAS GSLSVSNTVM VGYTCTVNDK YEAESASNRA | 960 |
| PGPVLEACTD TGGGQNFTGL KAGDWFAYNT LNVPVAGRYT ISFRVLSTAA SKIWIGHSTY | 1020 |
| KFDTISVPST GGVWKTITDT IRLPALNYTG VHILTGSPKF NWFSIDNCAV NEQAAATAYA | 1080 |
| KAEYPAKETD TKGPVLYPNP TNGQLTLDLR GQSYRRLTVL DIRGNLLRQW YIQKGERRIS | 1140 |
| RDISALPAGT YMLILEGDKN NKTFRIIKI | 1169 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.