CAZyme3D

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Entry ID

Information for CAZyme ID: QIZ07718.1

Basic Information

GenBank IDQIZ07718.1
FamilyCBM35
Sequence Length262
UniProt IDA0A6H1P2G9(100,100)Download
Average pLDDT?89.94
CAZy50 ID2493
CAZy50 RepNo, QUL57159.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1404
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusPriestia
SpeciesPriestia megaterium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMYDVTVRYA  TQNTGDLSID  HDRKNVLNIS  VNNTNGKWQS  SKVRMFLREG  INLIDIQSSA60
KLSLDYLHAS  YVNSDPIYSE  EAENAKVVGE  PAEGDPSLIR  DDALAKYASG  GKYVNGITSY120
DGKERNLELT  EVEVPEAGRY  KLVVKYANGE  YSGSHSYNNN  VVERYAKISV  NGGEPETVYF180
KNTISWQQFA  TVTIDVNLKK  GKNSIKFNNN  NTYDGGANPY  GGSNGSGTAP  FVDTVMVPKQ240
YTPVFDKFEI  YGQPTVVDKK  EK262

Predicted 3D structure by AlphaFold2 with pLDDT = 89.94 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM35(2-67)+CBM35(106-211)

MMYDVTVRYA  TQNTGDLSID  HDRKNVLNIS  VNNTNGKWQS  SKVRMFLREG  INLIDIQSSA60
KLSLDYLHAS  YVNSDPIYSE  EAENAKVVGE  PAEGDPSLIR  DDALAKYASG  GKYVNGITSY120
DGKERNLELT  EVEVPEAGRY  KLVVKYANGE  YSGSHSYNNN  VVERYAKISV  NGGEPETVYF180
KNTISWQQFA  TVTIDVNLKK  GKNSIKFNNN  NTYDGGANPY  GGSNGSGTAP  FVDTVMVPKQ240
YTPVFDKFEI  YGQPTVVDKK  EK262

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help