CAZyme3D

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Entry ID

Information for CAZyme ID: QIS69035.1

Basic Information

GenBank IDQIS69035.1
FamilyCBM42, GH54
Sequence Length523
UniProt IDA0A6H0CEL7(100,100)Download
Average pLDDT?92.10
CAZy50 ID60591
CAZy50 RepNo, AEO63099.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2721173
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. DSM 40868

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSVTPARPGR  ARPLALLALV  LALATALLGG  RAAAEGDAVA  AGSLPCDLYA  AGGTPCVAAH60
GTTRALYSAY  GGRLYQVKRA  SDGATRDIGA  LGAGGYADAA  AQDSFCAGTS  CLITVVYDQS120
GRGNHLTQAP  PGGFQGPAAG  GYDNLAEASA  APVTVGGHKA  YGVFIAPGTG  YRNNNTNGIA180
TGDQPEGMYA  LLDGSHYNSG  CCFDYGNAET  NSRDNGNGTM  ETIYFGNSKA  WGYGTGNGPW240
VMADLENGLF  SGVNRGYNAN  DPSVGHRFLT  AVVKGGPNHW  AIRVGNARSG  GLSTYYDGPR300
PNASGYNPMK  KEGAIILGIG  GDNSNSSAGT  FYEGVMTSGY  PSDATENAVQ  ANINAAGYAT360
SPPAGAPTVG  SRVSLRATTS  CCTTDYLRHN  TADNNAAIGA  VSSSSPTADK  AAATWIVRAG420
LGDASCVSFE  SADKPGQYLR  HYDFRLRVDA  LDSSALARLD  ATFCPQPSHN  GQGVSLRSAN480
YPGDFVRHYE  YGAYVASHGG  SHAWDSATAW  ADDTSWVVTS  PWA523

Predicted 3D structure by AlphaFold2 with pLDDT = 92.10 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH54(45-360)+CBM42(376-518)

MSVTPARPGR  ARPLALLALV  LALATALLGG  RAAAEGDAVA  AGSLPCDLYA  AGGTPCVAAH60
GTTRALYSAY  GGRLYQVKRA  SDGATRDIGA  LGAGGYADAA  AQDSFCAGTS  CLITVVYDQS120
GRGNHLTQAP  PGGFQGPAAG  GYDNLAEASA  APVTVGGHKA  YGVFIAPGTG  YRNNNTNGIA180
TGDQPEGMYA  LLDGSHYNSG  CCFDYGNAET  NSRDNGNGTM  ETIYFGNSKA  WGYGTGNGPW240
VMADLENGLF  SGVNRGYNAN  DPSVGHRFLT  AVVKGGPNHW  AIRVGNARSG  GLSTYYDGPR300
PNASGYNPMK  KEGAIILGIG  GDNSNSSAGT  FYEGVMTSGY  PSDATENAVQ  ANINAAGYAT360
SPPAGAPTVG  SRVSLRATTS  CCTTDYLRHN  TADNNAAIGA  VSSSSPTADK  AAATWIVRAG420
LGDASCVSFE  SADKPGQYLR  HYDFRLRVDA  LDSSALARLD  ATFCPQPSHN  GQGVSLRSAN480
YPGDFVRHYE  YGAYVASHGG  SHAWDSATAW  ADDTSWVVTS  PWA523

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help