Information for CAZyme ID: QIS01104.1
Basic Information
| GenBank ID | QIS01104.1 |
| Family | GT53 |
| Sequence Length | 1115 |
| UniProt ID | A0A6G9XJL6(100,100) |
| Average pLDDT? | 91.94 |
| CAZy50 ID | 8787 |
| CAZy50 Rep | No, UFT00193.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 37326 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia brasiliensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPDAATAVLT KPPAVPADSP ADFRTARIIA LVAGLLGALF AIATPFLPVT QTTAVLNWPQ | 60 |
| SGTLGNVQAP LMSQVPIDLK ATIPCSAVAQ LPERGGMLLA TAPPQGDRAA LEALFIRVSE | 120 |
| TSVDVVDRNA VVVSAPRADM EQCSSLVLTS DHDRTRAVFE GLTTTITKPV PGGGEEQVQV | 180 |
| PVEGALNGDL RPQVVGVFSE LKGAAPAGLG FTMTVDTRFS TSPTAIKLIA MIAAVLCTLI | 240 |
| ALAALARLDG SDGRGHRRFL PSNWLKPTWA DGAVVGTLLV WHFVGANTSD DGYILSMVRV | 300 |
| APHAGYMANY FRWYGVPEAP FGWYYYVIQL FAEISTASAW VRVPALLCAV LCWMVISREV | 360 |
| VPRLGRGVRQ SKVALWTGGL VFLAFWLPFD NGLRSEPIVA LGALLTWVSI ERAIATGRLV | 420 |
| PAGVAVLVAA FTLAAAPTGL MCVAALLAGI RPLVWIVVRK RRQFAEHGGK WWATLPLLAP | 480 |
| IAAAGLLVLI VVYSDQTFAG IQEANRVRQA TGPNLAWYED YLRYYYLFVE TVDGSLSRRF | 540 |
| AFLVMLLCLF TTMLVLLRRR RVPGIASGPT WRLMGVVFGT IFFMMFNPTK WTHHFGAYAG | 600 |
| IAGSLAAVTA VAVSASALRA RKNRAIFLAG LLFVLALAFS GINGYWYVSS FGVPWFDKRI | 660 |
| SLHGYQSNTL MLGLFGLALA LVAWHSLREG YAKPEASPRS ARGRRIRKFA AIPLTVVAAL | 720 |
| MVALEVLSLV KGAVAQYPAY SLARSNFDAL SGKSCGLAND VLVEADPNGG RLQPIPDPAL | 780 |
| TDPNDPLAGV DPVGFDPNGV PNDLSADSVE VKPGTGNTST QSVGAAFAEG QSAGTGGGQG | 840 |
| ARGVNGSTVA LPFGLDPATT PVLGSYQNGV QQPAHLTSSW YGLSPRSADS PLVVISAAGR | 900 |
| ILSVDDTGDT RYGQSLTVDY GRKLPDGSVE KLGTYLPRDI GPFPSWRNLR VPLAEIAPEA | 960 |
| DAVRIVANDP ILIGDQWLAF TPPRMPKLQS LNTFIGSEQP VLEDWAVGLQ FPCQRPFNHK | 1020 |
| NGVAEVPGYR ILPDRPLAIS STNTWQAEEF GGILGFSQML AKSVTVPTYL KDDYARDWGS | 1080 |
| LERYDQYDRS ATPAKLDTGT ATRSGFWTPG RLRVF | 1115 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.94 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT53(24-1113)
| MPDAATAVLT KPPAVPADSP ADFRTARIIA LVAGLLGALF AIATPFLPVT QTTAVLNWPQ | 60 |
| SGTLGNVQAP LMSQVPIDLK ATIPCSAVAQ LPERGGMLLA TAPPQGDRAA LEALFIRVSE | 120 |
| TSVDVVDRNA VVVSAPRADM EQCSSLVLTS DHDRTRAVFE GLTTTITKPV PGGGEEQVQV | 180 |
| PVEGALNGDL RPQVVGVFSE LKGAAPAGLG FTMTVDTRFS TSPTAIKLIA MIAAVLCTLI | 240 |
| ALAALARLDG SDGRGHRRFL PSNWLKPTWA DGAVVGTLLV WHFVGANTSD DGYILSMVRV | 300 |
| APHAGYMANY FRWYGVPEAP FGWYYYVIQL FAEISTASAW VRVPALLCAV LCWMVISREV | 360 |
| VPRLGRGVRQ SKVALWTGGL VFLAFWLPFD NGLRSEPIVA LGALLTWVSI ERAIATGRLV | 420 |
| PAGVAVLVAA FTLAAAPTGL MCVAALLAGI RPLVWIVVRK RRQFAEHGGK WWATLPLLAP | 480 |
| IAAAGLLVLI VVYSDQTFAG IQEANRVRQA TGPNLAWYED YLRYYYLFVE TVDGSLSRRF | 540 |
| AFLVMLLCLF TTMLVLLRRR RVPGIASGPT WRLMGVVFGT IFFMMFNPTK WTHHFGAYAG | 600 |
| IAGSLAAVTA VAVSASALRA RKNRAIFLAG LLFVLALAFS GINGYWYVSS FGVPWFDKRI | 660 |
| SLHGYQSNTL MLGLFGLALA LVAWHSLREG YAKPEASPRS ARGRRIRKFA AIPLTVVAAL | 720 |
| MVALEVLSLV KGAVAQYPAY SLARSNFDAL SGKSCGLAND VLVEADPNGG RLQPIPDPAL | 780 |
| TDPNDPLAGV DPVGFDPNGV PNDLSADSVE VKPGTGNTST QSVGAAFAEG QSAGTGGGQG | 840 |
| ARGVNGSTVA LPFGLDPATT PVLGSYQNGV QQPAHLTSSW YGLSPRSADS PLVVISAAGR | 900 |
| ILSVDDTGDT RYGQSLTVDY GRKLPDGSVE KLGTYLPRDI GPFPSWRNLR VPLAEIAPEA | 960 |
| DAVRIVANDP ILIGDQWLAF TPPRMPKLQS LNTFIGSEQP VLEDWAVGLQ FPCQRPFNHK | 1020 |
| NGVAEVPGYR ILPDRPLAIS STNTWQAEEF GGILGFSQML AKSVTVPTYL KDDYARDWGS | 1080 |
| LERYDQYDRS ATPAKLDTGT ATRSGFWTPG RLRVF | 1115 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.