Information for CAZyme ID: QIR30935.1
Basic Information
| GenBank ID | QIR30935.1 |
| Family | GT20 |
| Sequence Length | 976 |
| UniProt ID | A0A6G9RVL5(100,100) |
| Average pLDDT? | 74.70 |
| CAZy50 ID | 10874 |
| CAZy50 Rep | No, QGA88734.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 128810 |
| Kingdom | Eukaryota |
| Phylum | Streptophyta |
| Class | Magnoliopsida |
| Order | Poales |
| Family | Poaceae |
| Genus | Saccharum |
| Species | Saccharum hybrid cultivar |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSSDAAGGQR SISNCTRGDA AAAAMPTSSP FVGGDSSGGA GSPIRVDRMV REHGRRYDIF | 60 |
| ASDAMDTDGA EAASASAGAF AVDGVQSPGR ASPANMEDAG GAAAGHAARP PLAGSRSGFR | 120 |
| RLGLRGMKQR LLVVANRLPV SANRRGEDQW SLEISAGGLV SALLGVKDVD AKWIGWAGVN | 180 |
| VPDEVGQRAL TKALAEKRCI PVFLDEEIVH QYYNGYCNNI LWPLFHYLGL PQEDRLATTR | 240 |
| NFESQFDAYK RANQMFADVV YQHYQEGDVI WCHDYHLMFL PKCLKDHDIN MKVGWFLHTP | 300 |
| FPSSEIYRTL PSRLELLRSV LCADLVGFHT YDYARHFVSA CTRILGLEGT PEGVEDQGRL | 360 |
| TRVAAFPIGI DSDRFKRALE LPAVKRHISE LTERFAGRKV MLGVDRLDMI KGIPQKILAF | 420 |
| EKFLEENQDW NNKVVLLQIA VPTRTDVPEY QKLTSQVHEI VGRINGRFGT LTAVPIHHLD | 480 |
| RSLDFHALCA LYAVTDVALV TSLRDGMNLV SYEYVACQGS KKGVLILSEF AGAAQSLGAG | 540 |
| AILVNPWNIT EVADSIRHAL TMPSDEREKR HRHNYAHVTT HTAQDWAETF VFELNDTVAE | 600 |
| ALLRTRQVPP GLPSQTAIQQ YLRSKNRLLI LGFNSTLTEP VESSGRRGGD QIKEMELKLH | 660 |
| PDLKGPLRAL CEDEHTTVIV LSGSDRSVLD ENFGEFKMWL AAEHGMFLRP TYGEWMTTMP | 720 |
| EHLNMDWVDS VKHVFEYFTE RTPRSHFEHR ETSFVWNYKY ADVEFGRLQA RDMLQHLWTG | 780 |
| PISNAAVDVV QGSRSVEVRS VGVTKGAAID RILGEIVHSE NMVTPIDYVL CIGHFLGKDE | 840 |
| DIYVFFDPEY PSESKIKPEG GSASLDRRPN GRPPSNGRSS SRNPQSRTQK AQQAASERSS | 900 |
| SSSHSSASSN HDWREGSSVL DLKGENYFSC AVGRKRSNAR YLLSSSEEVV SFLKELASAT | 960 |
| AGFQSSCADY MFMDRQ | 976 |
Predicted 3D structure by AlphaFold2 with pLDDT = 74.70 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT20(127-595)
| MSSDAAGGQR SISNCTRGDA AAAAMPTSSP FVGGDSSGGA GSPIRVDRMV REHGRRYDIF | 60 |
| ASDAMDTDGA EAASASAGAF AVDGVQSPGR ASPANMEDAG GAAAGHAARP PLAGSRSGFR | 120 |
| RLGLRGMKQR LLVVANRLPV SANRRGEDQW SLEISAGGLV SALLGVKDVD AKWIGWAGVN | 180 |
| VPDEVGQRAL TKALAEKRCI PVFLDEEIVH QYYNGYCNNI LWPLFHYLGL PQEDRLATTR | 240 |
| NFESQFDAYK RANQMFADVV YQHYQEGDVI WCHDYHLMFL PKCLKDHDIN MKVGWFLHTP | 300 |
| FPSSEIYRTL PSRLELLRSV LCADLVGFHT YDYARHFVSA CTRILGLEGT PEGVEDQGRL | 360 |
| TRVAAFPIGI DSDRFKRALE LPAVKRHISE LTERFAGRKV MLGVDRLDMI KGIPQKILAF | 420 |
| EKFLEENQDW NNKVVLLQIA VPTRTDVPEY QKLTSQVHEI VGRINGRFGT LTAVPIHHLD | 480 |
| RSLDFHALCA LYAVTDVALV TSLRDGMNLV SYEYVACQGS KKGVLILSEF AGAAQSLGAG | 540 |
| AILVNPWNIT EVADSIRHAL TMPSDEREKR HRHNYAHVTT HTAQDWAETF VFELNDTVAE | 600 |
| ALLRTRQVPP GLPSQTAIQQ YLRSKNRLLI LGFNSTLTEP VESSGRRGGD QIKEMELKLH | 660 |
| PDLKGPLRAL CEDEHTTVIV LSGSDRSVLD ENFGEFKMWL AAEHGMFLRP TYGEWMTTMP | 720 |
| EHLNMDWVDS VKHVFEYFTE RTPRSHFEHR ETSFVWNYKY ADVEFGRLQA RDMLQHLWTG | 780 |
| PISNAAVDVV QGSRSVEVRS VGVTKGAAID RILGEIVHSE NMVTPIDYVL CIGHFLGKDE | 840 |
| DIYVFFDPEY PSESKIKPEG GSASLDRRPN GRPPSNGRSS SRNPQSRTQK AQQAASERSS | 900 |
| SSSHSSASSN HDWREGSSVL DLKGENYFSC AVGRKRSNAR YLLSSSEEVV SFLKELASAT | 960 |
| AGFQSSCADY MFMDRQ | 976 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.