CAZyme3D

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Entry ID

Information for CAZyme ID: QIP72298.1

Basic Information

GenBank IDQIP72298.1
FamilyGT8
Sequence Length777
UniProt IDA0A6G9EYD2(100,100)Download
Average pLDDT?91.96
CAZy50 ID27876
CAZy50 RepNo, QHY97741.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1821625
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. VN1

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTTTSPAPAA  ASPAPVTAAH  DLTGKRRIAF  ASYVDENYLP  GFLALLRSLA  LSNPGVCEDF60
VVLHDDLRPA  SIARIRALHP  RVVLRRVDTG  RYDAYKKGDQ  DNYLVRKAYF  ILDVFRIREY120
DTVITLDTDM  VVLGDLGELL  RLREGLAAVP  QFFYGQHKLN  SGLLVIQRPY  LSDAFCARLD180
ATGHSGDYEL  DKHDQGILNA  VLDGDFVRLD  ARYNFVKRRL  SGDLPVPDDT  AILHFTGRHK240
PWQGGEAGYA  LAEDRWREFD  LSDAEFHAAW  LDSPGALHHD  LLVHFGTPHI  RRTGNVEYAR300
KVAAAHIAAG  DYQDAVDILS  GVRIPLDEAW  PHEVLGQALM  SVSRDEEARA  RLLLASAAPN360
RAAVAHARLA  QMAWVRGDDA  EALRHATAGL  SVDITHRSSR  LWAQRAATVP  AQELGAPEDQ420
LAHVAFYMDR  QGNAGDKLLP  ETVRLGFGAD  TTSRRWHSVH  AHRYFDEAAV  ARVNARRGLV480
IGGGGLFIPD  TMPNGNSAWQ  WNVPDEHLRA  VDVPIMVYAV  GFNAFDGQSY  RAGRFRESLR540
LLVEKSSFFG  LRNHGSIAKV  RAMLPAHLHD  RVRFQPCPTT  VSRQLVPGWT  DPADREDTVL600
LNAAYDRAGL  RFGHDYGHFL  GEIAKAVRSI  GAHTEVRCVA  HSLDDEKIAF  DLRREYGISL660
PVVPMYDFDN  DEIRDLYART  RLVIGMRGHA  GMIPFGVGTP  IVSLISHPKM  AYFLADIERP720
EWGVSVHDKD  LGAVLTERAL  GILDDHAGTV  ADVHGRQREL  WKVTEANAAD  IRAILGS777

Predicted 3D structure by AlphaFold2 with pLDDT = 91.96 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT8(33-243)

MTTTSPAPAA  ASPAPVTAAH  DLTGKRRIAF  ASYVDENYLP  GFLALLRSLA  LSNPGVCEDF60
VVLHDDLRPA  SIARIRALHP  RVVLRRVDTG  RYDAYKKGDQ  DNYLVRKAYF  ILDVFRIREY120
DTVITLDTDM  VVLGDLGELL  RLREGLAAVP  QFFYGQHKLN  SGLLVIQRPY  LSDAFCARLD180
ATGHSGDYEL  DKHDQGILNA  VLDGDFVRLD  ARYNFVKRRL  SGDLPVPDDT  AILHFTGRHK240
PWQGGEAGYA  LAEDRWREFD  LSDAEFHAAW  LDSPGALHHD  LLVHFGTPHI  RRTGNVEYAR300
KVAAAHIAAG  DYQDAVDILS  GVRIPLDEAW  PHEVLGQALM  SVSRDEEARA  RLLLASAAPN360
RAAVAHARLA  QMAWVRGDDA  EALRHATAGL  SVDITHRSSR  LWAQRAATVP  AQELGAPEDQ420
LAHVAFYMDR  QGNAGDKLLP  ETVRLGFGAD  TTSRRWHSVH  AHRYFDEAAV  ARVNARRGLV480
IGGGGLFIPD  TMPNGNSAWQ  WNVPDEHLRA  VDVPIMVYAV  GFNAFDGQSY  RAGRFRESLR540
LLVEKSSFFG  LRNHGSIAKV  RAMLPAHLHD  RVRFQPCPTT  VSRQLVPGWT  DPADREDTVL600
LNAAYDRAGL  RFGHDYGHFL  GEIAKAVRSI  GAHTEVRCVA  HSLDDEKIAF  DLRREYGISL660
PVVPMYDFDN  DEIRDLYART  RLVIGMRGHA  GMIPFGVGTP  IVSLISHPKM  AYFLADIERP720
EWGVSVHDKD  LGAVLTERAL  GILDDHAGTV  ADVHGRQREL  WKVTEANAAD  IRAILGS777

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help