CAZyme3D

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Entry ID

Information for CAZyme ID: QIN30542.1

Basic Information

GenBank IDQIN30542.1
FamilyGT51
Sequence Length743
UniProt IDA0A6G8L0F8(100,100)Download
Average pLDDT?82.99
CAZy50 ID25620
CAZy50 RepNo, AZL07424.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID199591
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyBrevibacteriaceae
GenusBrevibacterium
SpeciesBrevibacterium luteolum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTGWTRWLPS  LRLIGVGILT  ACVVVIGLFS  VGYAVTDVPE  PNKEAAGQTS  TVYYDDGETV60
LGSFKTEDRK  NVTIDKISTP  MQQAAIAAED  NSFYENRGIS  IKGLSRAVIG  VATDNYAGGG120
STITQQYVKN  FYLTNERTLD  RKVKEMFIAL  KIDQELSKDE  ILANYLNTIY  LGRQSYGIEV180
ASKKYFDKPA  SELDVAESAL  LAAMIQRPGL  ADPAEDPGKY  EDRFKYVLGN  MAELGYITED240
EAASTEMPDV  RAAQTDNQFA  GPNGYLLDEV  RKELKRNGIE  DEVIDRGGLE  ITTTFSKKKM300
DAAVKAVEDL  PKLKEGMHVG  LVSMDPETGG  IVAMYGGKDF  LERQHSAATE  DITQAGSTFK360
PFTLVAGLEN  GYRLTDYLSG  TSGTPMNYEG  TRWSPKNYGG  ASYGPVSLLK  ATQSSVNTAY420
AQLNIEVGPE  KTVDVAARAG  LPKNTKGLEK  NAANVLGTAS  PTVKDMATAY  NTFASNGITH480
TPHTVKTAVT  PEGETLYEPD  TEGKRNFDKN  VMAETTYALS  RVVTGGSGSY  ASTLGRPAAG540
KTGTSQDNYS  AWFAGYTPNL  TTTVSIFRDD  GEGNPVEIGP  YGGRGSITGG  SFPTQTWTKY600
MKDALKDEPV  KKFPKRGKLP  QVEKPKPKSG  VPNQRPKPKP  SPKPKTTQDK  PKDDKPKDDK660
PKDEKPKDDE  TKEEEKPKEE  DPKPSEPPKN  DPPTVDPPKP  PTQKPEPPKD  ENKKDKEDKK720
NGGFQGAGFI  MPGFIRQGTV  SIL743

Predicted 3D structure by AlphaFold2 with pLDDT = 82.99 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(59-231)

MTGWTRWLPS  LRLIGVGILT  ACVVVIGLFS  VGYAVTDVPE  PNKEAAGQTS  TVYYDDGETV60
LGSFKTEDRK  NVTIDKISTP  MQQAAIAAED  NSFYENRGIS  IKGLSRAVIG  VATDNYAGGG120
STITQQYVKN  FYLTNERTLD  RKVKEMFIAL  KIDQELSKDE  ILANYLNTIY  LGRQSYGIEV180
ASKKYFDKPA  SELDVAESAL  LAAMIQRPGL  ADPAEDPGKY  EDRFKYVLGN  MAELGYITED240
EAASTEMPDV  RAAQTDNQFA  GPNGYLLDEV  RKELKRNGIE  DEVIDRGGLE  ITTTFSKKKM300
DAAVKAVEDL  PKLKEGMHVG  LVSMDPETGG  IVAMYGGKDF  LERQHSAATE  DITQAGSTFK360
PFTLVAGLEN  GYRLTDYLSG  TSGTPMNYEG  TRWSPKNYGG  ASYGPVSLLK  ATQSSVNTAY420
AQLNIEVGPE  KTVDVAARAG  LPKNTKGLEK  NAANVLGTAS  PTVKDMATAY  NTFASNGITH480
TPHTVKTAVT  PEGETLYEPD  TEGKRNFDKN  VMAETTYALS  RVVTGGSGSY  ASTLGRPAAG540
KTGTSQDNYS  AWFAGYTPNL  TTTVSIFRDD  GEGNPVEIGP  YGGRGSITGG  SFPTQTWTKY600
MKDALKDEPV  KKFPKRGKLP  QVEKPKPKSG  VPNQRPKPKP  SPKPKTTQDK  PKDDKPKDDK660
PKDEKPKDDE  TKEEEKPKEE  DPKPSEPPKN  DPPTVDPPKP  PTQKPEPPKD  ENKKDKEDKK720
NGGFQGAGFI  MPGFIRQGTV  SIL743

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help