CAZyme3D

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Entry ID

Information for CAZyme ID: QIJ71790.1

Basic Information

GenBank IDQIJ71790.1
FamilyGT4
Sequence Length415
UniProt IDA0A6G7PVZ3(100,100)Download
Average pLDDT?93.15
CAZy50 ID45986
CAZy50 RepNo, ADE56393.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1936021
KingdomBacteria
PhylumThermodesulfobacteriota
ClassThermodesulfobacteria
OrderThermodesulfobacteriales
FamilyThermodesulfobacteriaceae
GenusThermosulfuriphilus
SpeciesThermosulfuriphilus ammonigenes

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTEEILARYQ  QIAGTDVVDQ  LKQLAGALKG  ARVVHVNSTR  YGGGVAEILH  SLTAIKEALG60
LEIRWEVISG  DENFFRVTKA  MHNALQGFPQ  DISESALRVH  QEINAQQAEI  LRPVLEDADF120
VFIHDPQPAP  LIEFFPHRRG  KWVWRCHIDL  SRPHRPVWRY  LRDIVSKYEA  TIFSMPDFTQ180
PLPNLQYIIP  PSIDPLTLKN  QDLPQEEVDK  IFDRFKLTRE  KPLVVQVSRF  DRFKDPLGVI240
RAVRLARKFT  PVQLVLAGGG  AADDPEGEIV  LKEVKAAALD  DPDIRILFLP  PDEHLTINAL300
QRAADVVMQK  SIKEGFGLTV  TEAMWKGKPV  IGGDTGGIRS  QVVNHHTGFL  VRTPEGAALR360
IRYLLSYPER  RLEMGRKARQ  FVRDNFLITR  HVRDYLSLML  ALLRGTEERI  ELTAE415

Predicted 3D structure by AlphaFold2 with pLDDT = 93.15 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT4(219-375)

MTEEILARYQ  QIAGTDVVDQ  LKQLAGALKG  ARVVHVNSTR  YGGGVAEILH  SLTAIKEALG60
LEIRWEVISG  DENFFRVTKA  MHNALQGFPQ  DISESALRVH  QEINAQQAEI  LRPVLEDADF120
VFIHDPQPAP  LIEFFPHRRG  KWVWRCHIDL  SRPHRPVWRY  LRDIVSKYEA  TIFSMPDFTQ180
PLPNLQYIIP  PSIDPLTLKN  QDLPQEEVDK  IFDRFKLTRE  KPLVVQVSRF  DRFKDPLGVI240
RAVRLARKFT  PVQLVLAGGG  AADDPEGEIV  LKEVKAAALD  DPDIRILFLP  PDEHLTINAL300
QRAADVVMQK  SIKEGFGLTV  TEAMWKGKPV  IGGDTGGIRS  QVVNHHTGFL  VRTPEGAALR360
IRYLLSYPER  RLEMGRKARQ  FVRDNFLITR  HVRDYLSLML  ALLRGTEERI  ELTAE415

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help