CAZyme3D

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Entry ID

Information for CAZyme ID: QII47258.1

Basic Information

GenBank IDQII47258.1
FamilyCBM50, GH18
Sequence Length439
UniProt IDA0A6G7J9M0(100,100)Download
Average pLDDT?94.82
CAZy50 ID80301
CAZy50 RepNo, AHN23468.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1648923
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus paralicheniformis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRKEAFPIQI  YVVKRGDSLY  QIANRYRTTV  NEIVATNEIP  NPNRLVVGQT  IVIPIAGEFY60
EVRQGDTLAS  IGARFNIAPA  ELARINRIQV  SAILPVGLLL  YIPPRPKRNI  ETNAYIEPRG120
ESVSPALQQA  AREASPYLTY  LGAFSFQAKR  DGTLEEPPLN  NLKEIADRHR  TTMMMIVTNL180
ENEAFSDELG  RIILTDQNVK  NRLLDNIVAT  ARRYGFKDIH  FDFEYLRPED  REAYNQFLRD240
ARARFKQEGW  FISTALAPKT  RADQPGQWYE  AHDYRAHGEI  VDFVVLMTYE  WGYSGGPPMA300
VSPIGPVRDV  IEYALTEMPA  SKIVMGQNLY  GYDWTLPFTP  GGQLARAISP  QRAIEIASEN360
NAAIQYDETA  QAPFFRYTDN  AGKQHEVWFE  DARSIQAKFD  LIRELNLRGI  SYWKLGLSFP420
QNWLLIADQF  NVVKETFPS439

Predicted 3D structure by AlphaFold2 with pLDDT = 94.82 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM50(11-54)+CBM50(60-103)+GH18(167-416)

MRKEAFPIQI  YVVKRGDSLY  QIANRYRTTV  NEIVATNEIP  NPNRLVVGQT  IVIPIAGEFY60
EVRQGDTLAS  IGARFNIAPA  ELARINRIQV  SAILPVGLLL  YIPPRPKRNI  ETNAYIEPRG120
ESVSPALQQA  AREASPYLTY  LGAFSFQAKR  DGTLEEPPLN  NLKEIADRHR  TTMMMIVTNL180
ENEAFSDELG  RIILTDQNVK  NRLLDNIVAT  ARRYGFKDIH  FDFEYLRPED  REAYNQFLRD240
ARARFKQEGW  FISTALAPKT  RADQPGQWYE  AHDYRAHGEI  VDFVVLMTYE  WGYSGGPPMA300
VSPIGPVRDV  IEYALTEMPA  SKIVMGQNLY  GYDWTLPFTP  GGQLARAISP  QRAIEIASEN360
NAAIQYDETA  QAPFFRYTDN  AGKQHEVWFE  DARSIQAKFD  LIRELNLRGI  SYWKLGLSFP420
QNWLLIADQF  NVVKETFPS439

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help