CAZyme3D

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Entry ID

Information for CAZyme ID: QIH32710.1

Basic Information

GenBank IDQIH32710.1
FamilyGH163
Sequence Length732
UniProt IDA0A6G7BS89(100,100)Download
Average pLDDT?93.85
CAZy50 ID34072
CAZy50 RepNo, QQT61475.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2713573
KingdomBacteria
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp. DR205

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLALLFFTTI  AQAKERITLV  NEGVANYVIR  TDQNNSALLK  AAAVINEFTL  LSTGTGFELQ60
AREQDRPAII  LEQVPLSKSY  PEDSYSIQFK  GANMYIKGSG  KGVLYGAYRY  VRDIIGAKKW120
YTGRENTFVP  ELSSLVVDAD  FHVFAKPNFQ  FREVYFPIEL  DQEYLDWYGL  HNLEEKWGDW180
GHTFNKILPP  SVYFKEHPEY  YSLYHGKRQA  TQLCLSNEAV  FEHTVAYFRQ  RMLENPQAKY240
WSIAQNDDIG  SCTCDRCQAI  DKREGGAQGS  LIYFVNRVAA  KFPDKQFTTL  AYLQTANAPA300
HLRVANNVSV  ILSNIDAFRK  GDIGNEPSAA  TFRRQLRDWK  SKAAHVFVWD  YLTQFTNYLV360
PFPIQGTLQK  SLGYLKQQGV  EGVFLQGGGA  SYSDMAELNA  YILAHLLWDN  TISEEQLTDE420
FVNAYYGKAG  QAVKAYLNAR  RKALPAASSA  LSIYGNPIDN  RKDYLSPEQM  DHYSTLLEKA480
EIWSEGNLVL  EQRIRRLGLG  LDYTYLQQAR  FYGPRQHGIF  SNENGEWHVR  PNVQRKLQQF540
VEDAKKLGVA  ELAEGGASPN  QYAKEWSEIF  STGVRVNKAA  EAKMTMKYPF  DPSFPANGMQ600
TLTDRVPGYL  DYSYNWLLWT  GEPMEIAFNF  EKAKKVEAIE  LNFLQDARHW  IFIPKEIRIT660
ASKDGENFKE  LLSSKIEEID  EDYTVQKVKF  KAPVADDVKI  IRVYALPFSS  LPEWRYHPTR720
KVSIACDEIW  VD732

Predicted 3D structure by AlphaFold2 with pLDDT = 93.85 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH163(188-437)+CBM32(616-700)

MLALLFFTTI  AQAKERITLV  NEGVANYVIR  TDQNNSALLK  AAAVINEFTL  LSTGTGFELQ60
AREQDRPAII  LEQVPLSKSY  PEDSYSIQFK  GANMYIKGSG  KGVLYGAYRY  VRDIIGAKKW120
YTGRENTFVP  ELSSLVVDAD  FHVFAKPNFQ  FREVYFPIEL  DQEYLDWYGL  HNLEEKWGDW180
GHTFNKILPP  SVYFKEHPEY  YSLYHGKRQA  TQLCLSNEAV  FEHTVAYFRQ  RMLENPQAKY240
WSIAQNDDIG  SCTCDRCQAI  DKREGGAQGS  LIYFVNRVAA  KFPDKQFTTL  AYLQTANAPA300
HLRVANNVSV  ILSNIDAFRK  GDIGNEPSAA  TFRRQLRDWK  SKAAHVFVWD  YLTQFTNYLV360
PFPIQGTLQK  SLGYLKQQGV  EGVFLQGGGA  SYSDMAELNA  YILAHLLWDN  TISEEQLTDE420
FVNAYYGKAG  QAVKAYLNAR  RKALPAASSA  LSIYGNPIDN  RKDYLSPEQM  DHYSTLLEKA480
EIWSEGNLVL  EQRIRRLGLG  LDYTYLQQAR  FYGPRQHGIF  SNENGEWHVR  PNVQRKLQQF540
VEDAKKLGVA  ELAEGGASPN  QYAKEWSEIF  STGVRVNKAA  EAKMTMKYPF  DPSFPANGMQ600
TLTDRVPGYL  DYSYNWLLWT  GEPMEIAFNF  EKAKKVEAIE  LNFLQDARHW  IFIPKEIRIT660
ASKDGENFKE  LLSSKIEEID  EDYTVQKVKF  KAPVADDVKI  IRVYALPFSS  LPEWRYHPTR720
KVSIACDEIW  VD732

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help