Information for CAZyme ID: QIG39502.1
Basic Information
| GenBank ID | QIG39502.1 |
| Family | CBM22, CBM6, GH43_16 |
| Sequence Length | 805 |
| UniProt ID | A0A6G6W2Q7(100,100) |
| Average pLDDT? | 92.44 |
| CAZy50 ID | 14226 |
| CAZy50 Rep | No, UDF12168.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2567934 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Microbacterium |
| Species | Microbacterium sp. 4R-513 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRLDRRTGHR FAAMATAGLL LVAGLAMAGP ASAADEELIT NGGFENGTTG WFANNGNAAD | 60 |
| GATLALTTDA YAGASALRAS ARKTTGSGPM QDLSGKLQAG STYTVKARVK YDNPNSPATK | 120 |
| QFFVTMHYGG GTYTNLGSVT PQRGQWGYIN STFTIPATQS TATTRIFIET PWVDSATATA | 180 |
| APDTHLMDFT VDDVSLVGTP PPPPPSKTIE VVGKLPGEHN PLIGHKFGAD GFGFVDNGRV | 240 |
| YMYMTNDTQG YAPNPLTGIS PSIDYGKINQ VTLISSTDLV NWVDHGEIQV AGATGVAPFT | 300 |
| NNSWAPGMAK KTVNGKDKYF LYYANGGGSS NVITGDSPLG PWTSERTSTL INSSTPGAQG | 360 |
| VNWLFDPAPL VDDDGRSYLY FGGGPASTSF PAAERFNNPK NIRVIELGDD MISTKGTAAV | 420 |
| VDAPVAFEAS QVFKRNGKYY LSYSSHFGGS DFGGNQTPLP GYPGGGQIGY MMSDNPMSWP | 480 |
| KEAYAGVLFP NQSQFFGAGT GGNNHQSVFE YEGKYYFTYH APTLNKRING NTTQGYRSPH | 540 |
| IEELTFNADG TAKQVVGTYK GVDQVRSFDP YRVFEAETLG WSKGIATAKI AGPSGEFGAT | 600 |
| APNLAVTDVD NGDWTALSAV AFGDTGASSV TVKVKPAQAG GSIQVRSGSE TGAVLGTLPV | 660 |
| TGTAGQWTEI TAPLEGATGT KDVFFTYSGP SGDLFELDSY SFTAAPAAPS LDVSVVAGTR | 720 |
| CVAGKTVVTV QATNGEVVPV AVSLSSSFGA KSIAALAPGS STAQAFTSRQ VSVPAGSVSA | 780 |
| EVSATVDGKP ISVTVDAPYA ARSCG | 805 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.44 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM22(38-171)+GH43_16(219-551)+CBM6(575-703)
| MRLDRRTGHR FAAMATAGLL LVAGLAMAGP ASAADEELIT NGGFENGTTG WFANNGNAAD | 60 |
| GATLALTTDA YAGASALRAS ARKTTGSGPM QDLSGKLQAG STYTVKARVK YDNPNSPATK | 120 |
| QFFVTMHYGG GTYTNLGSVT PQRGQWGYIN STFTIPATQS TATTRIFIET PWVDSATATA | 180 |
| APDTHLMDFT VDDVSLVGTP PPPPPSKTIE VVGKLPGEHN PLIGHKFGAD GFGFVDNGRV | 240 |
| YMYMTNDTQG YAPNPLTGIS PSIDYGKINQ VTLISSTDLV NWVDHGEIQV AGATGVAPFT | 300 |
| NNSWAPGMAK KTVNGKDKYF LYYANGGGSS NVITGDSPLG PWTSERTSTL INSSTPGAQG | 360 |
| VNWLFDPAPL VDDDGRSYLY FGGGPASTSF PAAERFNNPK NIRVIELGDD MISTKGTAAV | 420 |
| VDAPVAFEAS QVFKRNGKYY LSYSSHFGGS DFGGNQTPLP GYPGGGQIGY MMSDNPMSWP | 480 |
| KEAYAGVLFP NQSQFFGAGT GGNNHQSVFE YEGKYYFTYH APTLNKRING NTTQGYRSPH | 540 |
| IEELTFNADG TAKQVVGTYK GVDQVRSFDP YRVFEAETLG WSKGIATAKI AGPSGEFGAT | 600 |
| APNLAVTDVD NGDWTALSAV AFGDTGASSV TVKVKPAQAG GSIQVRSGSE TGAVLGTLPV | 660 |
| TGTAGQWTEI TAPLEGATGT KDVFFTYSGP SGDLFELDSY SFTAAPAAPS LDVSVVAGTR | 720 |
| CVAGKTVVTV QATNGEVVPV AVSLSSSFGA KSIAALAPGS STAQAFTSRQ VSVPAGSVSA | 780 |
| EVSATVDGKP ISVTVDAPYA ARSCG | 805 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.