Information for CAZyme ID: QHW29730.1
Basic Information
GenBank ID | QHW29730.1 |
Family | CBM35, CBM6, GH87 |
Sequence Length | 826 |
UniProt ID | A0A6C0NU38(100,100)![]() |
Average pLDDT? | 91.41 |
CAZy50 ID | 1958 |
CAZy50 Rep | No, QHW33736.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2704463 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus rhizovicinus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MFNRKVKKVV YSVMALTLMA GGLLATERKT DAAPIPETVT YSALSSFGAS QGIGNWFNMK | 60 |
KTGTVYSYLG TYDATTPAKW KEASGYPYVR DSFFHPETTN DAVKKWVAPQ AGNVTITGNV | 120 |
LKVNASSNGV IAKIFKNTTQ LWSATVTSAA DATPSGVSNI HVEAGDALYF VINANGDMNF | 180 |
DETNWSPVVT MTTAIKIEAE SYDSMSGVSA AATTDTGGGQ QVGSFDTNDY LVYNNVNLSG | 240 |
GYKTLEARVA DTATGGKFEV RLDSLTGPVI STFTVANTDG WNNFETQSWP ITGSATGTHN | 300 |
LYVKGVVGAG IANINWFRLT NNNTRGATVP FTTYEAESGT LGGGATTNND ATVKKEASSG | 360 |
KSYVHLDATN ESVQWTNVRD ANRMIVRYSI PQNSSGTLAL YVNGVKRQDL SLTSTFNYDT | 420 |
APGNSYVRSF DDKDFAIDIN AGDTIMLKKD SGNSLAWYGI DLIDLETAAA PIALPANAIS | 480 |
VKSSPYNAVG NGVADDTAAI QSAVNAAASL GKNVYFPPGT YNQSDKITVP SGVSVYGAGI | 540 |
WYSHLHSTVT NNVWGGEVGF TLNNNTTISD LRISSVDTQR DSHYGIAILS NAGTGSNNVL | 600 |
QNLWAEHMGC LEGWTDWKNS TIQNVRLYNT YFDGIHWGDD GNSGNVAQNN FMRGLGDDGV | 660 |
AQVNLMNFAN VAQNNVAQFN TIIASYWGRG MSDVGGNSLT YRDNYIDSTY LAGMIITTEP | 720 |
VEPTKPSYTI SGLKFQRNTI NKAGHTGHNH ASIQFWLDVN PMQNVRVELN TITNGETEGI | 780 |
HIDNTSYGDS GGRTQFNFNV ASGNALSNYT NANSLVVPVL NGNTGF | 826 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.41 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM6(197-320)+GH87(315-790)
MFNRKVKKVV YSVMALTLMA GGLLATERKT DAAPIPETVT YSALSSFGAS QGIGNWFNMK | 60 |
KTGTVYSYLG TYDATTPAKW KEASGYPYVR DSFFHPETTN DAVKKWVAPQ AGNVTITGNV | 120 |
LKVNASSNGV IAKIFKNTTQ LWSATVTSAA DATPSGVSNI HVEAGDALYF VINANGDMNF | 180 |
DETNWSPVVT MTTAIKIEAE SYDSMSGVSA AATTDTGGGQ QVGSFDTNDY LVYNNVNLSG | 240 |
GYKTLEARVA DTATGGKFEV RLDSLTGPVI STFTVANTDG WNNFETQSWP ITGSATGTHN | 300 |
LYVKGVVGAG IANINWFRLT NNNTRGATVP FTTYEAESGT LGGGATTNND ATVKKEASSG | 360 |
KSYVHLDATN ESVQWTNVRD ANRMIVRYSI PQNSSGTLAL YVNGVKRQDL SLTSTFNYDT | 420 |
APGNSYVRSF DDKDFAIDIN AGDTIMLKKD SGNSLAWYGI DLIDLETAAA PIALPANAIS | 480 |
VKSSPYNAVG NGVADDTAAI QSAVNAAASL GKNVYFPPGT YNQSDKITVP SGVSVYGAGI | 540 |
WYSHLHSTVT NNVWGGEVGF TLNNNTTISD LRISSVDTQR DSHYGIAILS NAGTGSNNVL | 600 |
QNLWAEHMGC LEGWTDWKNS TIQNVRLYNT YFDGIHWGDD GNSGNVAQNN FMRGLGDDGV | 660 |
AQVNLMNFAN VAQNNVAQFN TIIASYWGRG MSDVGGNSLT YRDNYIDSTY LAGMIITTEP | 720 |
VEPTKPSYTI SGLKFQRNTI NKAGHTGHNH ASIQFWLDVN PMQNVRVELN TITNGETEGI | 780 |
HIDNTSYGDS GGRTQFNFNV ASGNALSNYT NANSLVVPVL NGNTGF | 826 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.